Researcher Portfolio
Soumpasis, D.M.
Department of Molecular Biology, MPI for biophysical chemistry, Max Planck Society
Researcher Profile
Position: Department of Molecular Biology, MPI for biophysical chemistry, Max Planck Society
Researcher ID: https://pure.mpg.de/cone/persons/resource/persons15847
Publications
(1 - 25 of 29)
: Soumpasis, D. M., & Georgalis, Y. (1997). Potential of mean force treatment of salt-mediated protein crystallization. Biophysical Journal, 72(6), 2770-2774. [PubMan] : Garcia, A. E., Hummer, G., & Soumpasis, D. M. (1997). Hydration of an alpha-helical peptide: Comparison of theory and molecular dynamics simulation. Proteins-Structure Function and Genetics, 27(4), 471-480. [PubMan] : Garcia, A. E., Hummer, G., & Soumpasis, D. M. (1997). A statistical mechanical description of biomolecular hydration. Biophysical Journal, 72(2), MP460-MP460. [PubMan] : von Kitzing, E., & Soumpasis, D. M. (1996). Electrostatics of a simple membrane model using Green's functions formalism. Biophysical Journal, 71(2), 795-810. [PubMan] : Tung, C. S., & Soumpasis, D. M. (1996). Structural prediction of A- and B-DNA duplexes based on coordinates of the phosphorus atoms. Biophysical Journal, 70(2), 917-923. [PubMan] : Tung, C. S., & Soumpasis, D. M. (1996). Structural prediction of B-DNA duplexes based on coordinates of the phosphorus atoms. Biophysical Journal, 70(2), SUPM3-SUPM3. [PubMan] : Hummer, G., Garcia, A. E., & Soumpasis, D. M. (1996). A statistical mechanical description of biomolecular hydration. Faraday Discussions, (103), 175-189. [PubMan] : Georgalis, Y., Schuler, J., Frank, J., Soumpasis, D. M., & Saenger, W. (1995). Protein crystallization screening through scattering techniques. Advances in Colloid and Interface Science, 58(1), 57-86. [PubMan] : Hummer, G., Garcia, A. E., & Soumpasis, D. M. (1995). Hydration of nucleic-acid fragments comparison of theory and experiment for high-resolution crystal-structures of RNA, DNA and DNA-drug complexes. Biophysical Journal, 68(5), 1639-1652. [PubMan] : Hummer, G., & Soumpasis, D. M. (1994). Statistical mechanical treatment of the structural hydration of biological macromolecules: results for B-DNA. Physical Review E, 50(6), 5085-5095. [PubMan] : Hummer, G., Soumpasis, D. M., & Neumann, M. (1994). Computer simulation of aqueous Na-Cl electrolytes. Journal of Physics-Condensed Matter, 6(Suppl. Suppl. 23), A141-A144. [PubMan] : Tung, C. S., Soumpasis, D. M., & Hummer, G. (1994). An extension of the rigorous base-unit oriented description of nucleic acid structures. Journal of Biomolecular Structure & Dynamics, 11(6), 1327-1344. [PubMan] : Garcia, A. E., Soumpasis, D. M., & Jovin, T. M. (1994). Dynamics and relative stabilities of parallel- and antiparallel-stranded DNA duplexes. Biophysical Journal, 66(6), 1742-1755. [PubMan] : Hummer, G., Soumpasis, D. M., & Neumann, M. (1994). Computer simulation do not support CL-CL pairing in aqueous NaCL solution. Molecular Physics, 81(5), 1155-1163. [PubMan] : Garcia, A. E., Hummer, G., & Soumpasis, D. M. (1994). Theoretical description of protein hydration: a potential of mean force calculation based on 2 and 3 particle correlation functions. Biophysical Journal, 66(2), A130-A130. [PubMan] : Hummer, G., Garcia, A. E., & Soumpasis, D. M. (1994). The hydration of A-DNA, B-DNA, and Z-DNA studied with the potentials of mean force approach. Biophysical Journal, 66(2), A25-A25. [PubMan] : Hummer, G., & Soumpasis, D. M. (1994). Computation of the water density distribution at the ice-water interface using the potentials-of-mean-force expansion. Physical Review E, 49(1), 591-596. [PubMan] : Hummer, G., Soumpasis, D. M., & Neumann, M. (1993). Pair correlations in an NACL-SPC water model simulations versus extended rism computations (Molecular Physics, Vol 77, Pg 769, 1992). Molecular Physics, 78(2), 497-497. [PubMan] : Hummer, G., & Soumpasis, D. M. (1993). Correlations and free energies in restricted primitive model descriptions of electrolytes. Journal of Chemical Physics, 98(1), 581-591. [PubMan] : Klement, R., Soumpasis, D. M., & Jovin, T. M. (1991). Computation of ionic distributions around charged biomolecular structures: Results for right-handed and left-handed DNA. Proceedings of the National Academy of Sciences of the United States of America, 88(11), 4631-4635. [PubMan] : Soumpasis, D. M., Tung, C. S., & Garcia, A. E. (1991). Rigorous description of DNA structures. II. On the computation of best axes, planes, and helices from atomic coordinates. Journal of Biomolecular Structure & Dynamics, 8(4), 867-888. [PubMan] : Garcia, A. E., Gupta, G., Soumpasis, D. M., & Tung, C. S. (1990). Energetics of the hairpin to mismatched duplex transition of d(GCCGCAGC) on NaCl solution. Journal of Biomolecular Structure & Dynamics, 8(1), 173-186. [PubMan] : Klement, R., Soumpasis, D. M., von Kitzing, E., & Jovin, T. M. (1990). Inclusion of ionic interactions in force field calculations of charged biomolecules – DNA structural transitions. Biopolymers, 29(6-7), 1089-1103. doi:10.1002/bip.360290620. [PubMan] : Garcia, A. E., & Soumpasis, D. (1989). Harmonic vibrations and thermodynamic stability of a DNA oligomer in monovalent salt solution. Proceedings of the National Academy of Sciences of the United States of America, 86(9), 3160-3164. [PubMan] : Soumpasis, D., & Tung, C. S. (1988). A rigorous basepair oriented description of DNA structures. Journal of Biomolecular Structure and Dynamics, 6(3), 397-420. doi:10.1080/07391102.1988.10506497. [PubMan]