Researcher Portfolio

Dr. Osorio Valeriano, Manuel

Max Planck Fellow Bacterial Cell Biology, Max Planck Institute for Terrestrial Microbiology, Max Planck Society

Researcher Profile

Position: Max Planck Fellow Bacterial Cell Biology, Max Planck Institute for Terrestrial Microbiology, Max Planck Society

Researcher ID: https://pure.mpg.de/cone/persons/resource/persons263957

External references

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Publications

(1 - 25 of 38)

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: Igolkina, A., Vorbrugg, S., Rabanal, F., Liu, H.-J., Ashkenazy, H., Kornienko, A., Fitz, J., Collenberg, M., Kubica, C., Mollá Morales, A., Jaegle, B., Wrightsman, T., Voloshin, V., Bezlepsky, A., Llaca, V., Nizhynska, V., Reichardt, I., Bezrukov, I., Lanz, C., Bemm, F., Flood, B., Nemomissa, S., Hancock, A., Guo, Y.-L., Kersey, P., Weigel, D., & Nordborg, M. (2025). A comparison of 27 Arabidopsis thaliana genomes and the path toward an unbiased characterization of genetic polymorphism. Nature Genetics, 57(9), 2289-2301. doi:10.1038/s41588-025-02293-0. [PubMan] : Movilli, A., Sushko, S., Rabanal, F., & Weigel, D. (2025). Transposable element mobilization in the soma of hypomethylated Arabidopsis thaliana. Poster presented at Congress of the European Society for Evolutionary Biology (ESEB 2025), Barcelona, Spain. [PubMan] : Xian, W., Carbonell-Bejerano, P., Rabanal, F., Bezrukov, I., Reymond, P., & Weigel, D. (2025). Minimizing detection bias of somatic mutations in a highly heterozygous oak genome. G3: Genes, Genomes, Genetics, 15(8): jkaf143. doi:10.1093/g3journal/jkaf143. [PubMan] : Movilli, A., Sushko, S., Rabanal, F., & Weigel, D. (2025). Long-read detection of transposable element mobilization in the soma of hypomethylated Arabidopsis thaliana individuals. Genome Biology, 26(1): 231. doi:10.1186/s13059-025-03691-7. [PubMan] : Dong, X., Jiao, W.-B., Campoy, J., Rabanal, F., Ton, J., Smith, L., Weigel, D., & Schneeberger, K. (submitted). The mutational dynamics of the Arabidopsis centromeres. [PubMan] : Bao, Z., Guarracino, A., Rabanal, F., Vorbrugg, S., Xian, W., Garrison, E., & Weigel, D. (2025). Understanding mutational processes from Arabidopsis pangenome graphs. In 2025 Meeting on Biology of Genomes (pp. 30). [PubMan] : Gorringe, N., Topp, S., Burns, R., Yamaguchi, S., Rabanal, F., Fernandes, J., Weigel, D., Kakutani, T., Naish, M., & Henderson, I. (submitted). Natural variation modifies centromere proximal meiotic crossover frequency and segregation distortion in Arabidopsis thaliana. [PubMan] : The 1001 Genomes Plus Consortium, Alonso-Blanco, C., Ashkenazy, H., Baduel, P., Bao, Z., Becker, C., Caillieux, E., Colot, V., Crosbie, D., De Oliveira, L., Fitz, J., Fritschi, K., Grigoreva, E., Guo, Y., Habring, A., Henderson, I., Hou, X.-H., Hu, Y., Igolkina, A., Kang, M., Kemen, E., Kersey, P., Kornienko, A., Lian, Q., Liu, H., Liu, J., Lucke, M., Mayjonade, B., Mercier, R., Mollá Morales, A., Movilli, A., Murray, K., Naish, M., Nordborg, M., Rabanal, F., Roux, F., Schandry, N., Schneeberger, K., Schwab, R., Shirsekar, G., Sushko, S., Tao, Y., Teasdale, L., Vorbrugg, S., Weigel, D., & Xian, W. (submitted). The 1001G+ project: A curated collection of Arabidopsis thaliana long-read genome assemblies to advance plant research. [PubMan] : Sushko, S., Bao, Z., Rabanal, F., & Weigel, D. (2024). Towards a panTEome of Arabidopsis thaliana. Poster presented at 2024 Meeting on Transposable Elements, Cold Spring Harbor, NY, USA. [PubMan] : Igolkina, A., Vorbrugg, S., Rabanal, F., Liu, H.-J., Ashkenazy, H., Kornienko, A., Weigel, D., & Nordborg, M. (2024). Towards an unbiased characterization of genetic diversity. In O. Barabas, C. Feschotte, & R. Martienssen (Eds.), 2024 Meeting on Transposable Elements (pp. 53). Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory. [PubMan] : Movilli, A., Rabanal, F., & Weigel, D. (2024). Single-molecule methods for detecting somatic TE mobilization in plants. Poster presented at 2024 Meeting on Transposable Elements, Cold Spring Harbor, NY, USA. [PubMan] : Rabanal, F. (2024). Natural Variation in the Most Repetitive Elements of Arabidopsis thaliana Genomes. Talk presented at MBG Young Investigator Symposium 2024. Aarhus, Denmark. 2024-10-07 - 2024-10-08. [PubMan] : Tao, Y., Xian, W., Bao, Z., Rabanal, F., Movilli, A., Lanz, C., Shirsekar, G., & Weigel, D. (2024). Atlas of telomeric repeat diversity in Arabidopsis thaliana. Genome Biology: Biology for the Post-Genomic Era, 25(1): 244. doi:10.1101/2023.12.18.572118. [PubMan] : Yamaguchi, S., Rabanal, F., Inagaki, S., Weigel, D., & Kakutani, T. (2024). Screening for epigenetic diversity of centromeres within natural populations of Arabidopsis thaliana. Poster presented at Plant Epigenetics: EPIPLANT Society for Experimental Biology, Clermont-Ferrand, France. [PubMan] : Bao, Z., Rabanal, F., Guarracino, A., Vorbrugg, S., Xian, W., Movilli, A., Teasdale, L., Murray, K., Shirsekar, G., Tao, Y., Lucke, M., Garrison, E., & Weigel, D. (2024). Understanding mutational processes from Arabidopsis pangeome graphs. In 34th International Conference on Arabidopsis Research (ICAR 2024) (pp. 156). [PubMan] : Ellis, T., Gunis, J., Clauw, P., Rabanal, F., & Nordborg, M. (2024). The Effect of Population Structure Correction on GWAS Before and After Random Mating. In 7th International Conference of Quantitative Genetics: ICQG7 (pp. 25). [PubMan] : Fernandes, J., Naish, M., Lian, Q., Burns, R., Tock, A., Rabanal, F., Wlodzimierz, P., Habring, A., Nicholas, R., Weigel, D., Mercier, R., & Henderson, I. (2024). Structural variation and DNA methylation shape the centromere-proximal meiotic crossover landscape in Arabidopsis. Genome Biology, 25(1): 30. doi:10.1186/s13059-024-03163-4. [PubMan] : Rabanal, F., Wlodzimierz, P., Burns, R., Naish, M., Primetis, E., Bousios, A., Weigel, D., & Henderson, I. (2023). The Evolution of Aarabidopsis Centromeres. In 14th International Conference of the French Society of Plant Biology (PBE 2023) (pp. 58). [PubMan] : Kersten, S., Rabanal, F., Herrmann, J., Hess, M., Kronenberg, Z., Schmid, K., & Weigel, D. (2023). Deep haplotype analyses of target-site resistance locus ACCase in blackgrass enabled by pool-based amplicon sequencing. Plant Biotechnology Journal, 21(6): uqad008, pp. 1240-1253. doi:10.1111/pbi.14033. [PubMan] : Wlodzimierz, P., Rabanal, F., Burns, R., Naish, M., Primetis, E., Scott, A., Mandáková, T., Gorringe, N., Tock, A., Holland, D., Fritschi, K., Habring, A., Lanz, C., Patel, C., Schlegel, T., Collenberg, M., Mielke, M., Nordborg, M., Roux, F., Shirsekar, G., Alonso-Blanco, C., Lysak, M., Novikova, P., Bousios, A., Weigel, D., & Henderson, I. (2023). Cycles of satellite and transposon evolution in Arabidopsis centromeres. Nature, 618(7965), 557-565. doi:10.1038/s41586-023-06062-z. [PubMan] : Gu, B., Parkes, T., Rabanal, F., Smith, C., Lu, F.-H., McKenzie, N., Dong, H., Weigel, D., Jones, J., Cevik, V., & Bevan, M. (2023). The integrated LIM-peptidase domain of the CSA1-CHS3/DAR4 paired immune receptor detects changes in DA1 peptidase inhibitors in Arabidopsis. Cell Host & Microbe, 31(6), 949-961. doi:10.1016/j.chom.2023.04.009. [PubMan] : Henderson, I., Wlodzimierz, P., Rabanal, F., Burns, R., Naish, M., Primetis, E., Scott, A., Mandakova, T., Gorringe, N., Tock, A., Collenberg, M., Mielke, M., Shirsekar, G., Alonso-Blanco, C., Roux, F., Lysak, M., Novikov, P., Nordborg, M., Bousios, A., & Weigel, D. (2023). Rapid cycles of satellite homogenization and retrotransposon invasion drive Arabidopsis pancentromere evolution. In 33rd International Conference on Arabidopsis Research (ICAR 2023). [PubMan] : Kersten, S., Chang, J., Huber, C., Voichek, Y., Lanz, C., Hagmaier, T., Lang, P., Lutz, U., Hirschberg, I., Lerchl, J., Porri, A., Van de Peer, Y., Schmid, K., Weigel, D., & Rabanal, F. (2023). Standing genetic variation fuels rapid evolution of herbicide resistance in blackgrass. Proceedings of the National Academy of Sciences of the United States of America, 120(16): e2206808120. doi:10.1073/pnas.2206808120. [PubMan] : Kersten, S., Chang, J., Huber, C., Voichek, Y., Lanz, C., Hagmaier, T., Lang, P., Lutz, U., Hirschberg, I., Lerchl, J., Porri, A., Van de Peer, Y., Schmid, K., Weigel, D., & Rabanal, F. (2023). Standing genetic variation fuels rapid evolution of herbicide resistance in blackgrass. Proceedings of the National Academy of Sciences of the United States of America, 120(16): e2206808120. doi:10.1073/pnas.2206808120. [PubMan] : Jaegle, B., Pisupati, H., Soto-Jiménez, L., Burns, R., Rabanal, F., & Nordborg, M. (2023). Extensive sequence duplication in Arabidopsis revealed by pseudo-heterozygosity. Genome Biology, 24(1): 44. doi:10.1186/s13059-023-02875-3. [PubMan]