Researcher Portfolio

 
   

Bemm, Felix M

Department Molecular Biology, Max Planck Institute for Biology Tübingen, Max Planck Society, Department Molecular Biology, Max Planck Institute for Developmental Biology, Max Planck Society  

 

Researcher Profile

 
Position: Department Molecular Biology, Max Planck Institute for Developmental Biology, Max Planck Society
Position: Department Molecular Biology, Max Planck Institute for Biology Tübingen, Max Planck Society
Researcher ID: https://pure.mpg.de/cone/persons/resource/persons272552

External references

 

Publications

 
  (1 - 25 of 33)
 : Maerkle, H., Ruffley, M., Demirjian, C., Chang, T.-H., McLoughlin, C., Thoen, M., Lucas, L., Ahmad, A., Radharamanan, K., Mayjonade, B., Hernandez, A., Gautam, A., Lyssak, M., Bemm, F., Wrightsman, T., Weigel, D., Roux, F., Jhaand, A., & Bergelson, J. (2024). Exploring the NLR-Effector Interactome: A Journey from Ecological Complexity to Functional Biology. In 34th International Conference on Arabidopsis Research (ICAR 2024) (pp. 579). [PubMan] : Igolkina, A., Vorbrugg, S., Rabanal, F., Liu, H.-J., Ashkenazy, H., Kornienko, A., Fitz, J., Collenberg, M., Kubica, C., Mollá Morales, A., Jaegle, B., Wrightsman, T., Voloshin, V., Llaca, V., Nizhynska, V., Reichardt, I., Lanz, C., Bemm, F., Flood, B., Nemomissa, S., Hancock, A., Guo, Y.-L., Kersey, P., Weigel, D., & Nordborg, M. (submitted). Towards an unbiased characterization of genetic polymorphism. [PubMan] : Barragan, A., Collenberg, M., Schwab, R., Kersten, S., Kerstens, M., Požárová, D., Bezrukov, I., Bemm, F., Kolár, F., & Weigel, D. (2024). Deleterious Phenotypes in Wild Arabidopsis arenosa Populations Are Common and Linked to Runs of Homozygosity. G3: Genes, Genomes, Genetics, 14(3): jkad290. doi:10.1093/g3journal/jkad290. [PubMan] : Fraser, B., Whiting, J., Paris, J., Weadick, C., Parsons, P., Charlesworth, D., Bergero, R., Bemm, F., Hoffmann, M., Kottler, V., Liu, C., Dreyer, C., & Weigel, D. (2020). Improved Reference Genome Uncovers Novel Sex-Linked Regions in the Guppy (Poecilia reticulata). Genome Biology and Evolution, 12(10), 1789-1805. doi:10.1093/gbe/evaa187. [PubMan] : Kreiner, J., Giacomini, D., Bemm, F., Waithaka, B., Regalado, J., Lanz, C., Hildebrandt, J., Sikkema, P., Tranel, P., Weigel, D., Stinchcombe, J., & Wright, S. (2019). Multiple modes of convergent adaptation in the spread of glyphosate-resistant Amaranthus tuberculatus. Proceedings of the National Academy of Sciences of the United States of America, 116(42), 21076-21084. doi:10.1073/pnas.1900870116. [PubMan] : Van de Weyer, A.-L., Monteiro, F., Furzer, O., Nishimura, M., Cevik, V., Witek, K., Jones, J., Dangl, J., Weigel, D., & Bemm, F. (2019). A Species-Wide Inventory of NLR Genes and Alleles in Arabidopsis thaliana. Cell, 178(5), 1260-1272. doi:10.1016/j.cell.2019.07.038. [PubMan] : Furzer, O., Van de Weyer, A.-L., Monteiro, F., Nishimura, M., Cevik, V., Witek, K., Jones, J., Dangl, J., Weigel, D., & Bemm, F. (2019). The Arabidopsis thaliana pan-NLRome. In 30th International Conference on Arabidopsis Research (ICAR 2019). [PubMan] : Koenig, D., Hagmann, J., Li, R., Bemm, F., Slotte, T., Neuffer, B., Wright, S., & Weigel, D. (2019). Long-term balancing selection drives evolution of immunity genes in Capsella. eLife, 8: e43606. doi:10.7554/eLife.43606. [PubMan] : Kreiner, M., Giacomini, D., Waithaka, B., Bemm, F., Lanz, C., Hildebrandt, J., Regalado, J., Sikkema, P., Tranel, P., Weigel, D., Stinchcombe, J., & Wright, S. (2019). Whole-Genome Sequencing Provides Insights into Waterhemp Evolution. In Fifty-Ninth Meeting of the Weed Science Society of America (WSSA 2019). [PubMan] : Giacomini, D., Kreiner, J., Waithaka, B., Bemm, F., Lanz, C., Hildebrandt, J., Regalado, J., Sikkema, P., Stinchcombe, J., Wright, S., Weigel, D., & Tranel, P. (2018). A High-Quality Whole-Genome Assembly of Waterhemp (Amaranthus tuberculatus). In 2018 North Central Weed Science Society Proceedings (pp. 23). [PubMan] : Zhou, S., Bemm, F., Rödelsperger, C., & Streit, A. (2018). Absence of meiotic recombination in the sex chromatin of the nematode Strongyloides papillosus. In Molecular and Cellular Biology of Helminths XII (pp. 23). [PubMan] : Zhu, W., Zaidem, M., Van de Weyer, A.-L., Gutaker, R., Chae, E., Kim, S.-T., Bemm, F., Lei, L., Todesco, M., Schwab, R., Unger, F., Beha, M., Demar, M., & Weigel, D. (2018). Modulation of ACD6 dependent hyperimmunity by natural alleles of an Arabidopsis thaliana NLR resistance gene. PLoS Genetics, 14(9): e1007628. doi:10.1371/journal.pgen.1007628. [PubMan] : Schwandner, A., Ochßner, I., Hausmann, L., Kamal, N., Pucker, B., Holtgräwe, D., Bemm, F., Weigel, D., Weisshaar, B., & Töpfer, R. (2018). Determination of genetic loci in the control network of grapevine flowering. Den Haag, The Netherlands: International Society for Horticultural Science. doi:10.17660/ActaHortic.2019.1248.48. [PubMan] : Alexandre, C., Urton, J., Jean-Baptiste, K., Huddleston, J., Dorrity, M., Cuperus, J., Sullivan, A., Bemm, F., Jolic, D., Arsovski, A., Thompson, A., Nemhauser, J., Fields, S., Weigel, D., Bubb, K., & Queitsch, C. (2018). Complex Relationships between Chromatin Accessibility, Sequence Divergence, and Gene Expression in Arabidopsis thaliana. Molecular Biology and Evolution, 35(4), 837-854. doi:10.1093/molbev/msx326. [PubMan] : Michael, T., Jupe, F., Bemm, F., Motley, S., Sandoval, J., Lanz, C., Loudet, O., Weigel, D., & Ecker, J. (2018). High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell. Nature Communications, 9: 541. doi:10.1038/s41467-018-03016-2. [PubMan] : Bemm, F. (2017). Population Scale Structural Variation Detection and Genotyping using Whole Genome Variation Graphs. Talk presented at EMEA User Group Meeting 2017. Barcelona, Spain. 2017-11-02 - 2017-11-03. [PubMan] : Rödelsperger, C., Meyer, J., Prabh, N., Lanz, C., Bemm, F., & Sommer, R. (2017). Single-Molecule Sequencing Reveals the Chromosome-Scale Genomic Architecture of the Nematode Model Organism Pristionchus pacificus. Cell Reports, 21(3), 834-844. doi:10.1016/j.celrep.2017.09.077. [PubMan] : Kubica, C., Bemm, F., & Weigel, D. (2017). Building usable full genome variation graphs. Poster presented at German Conference on Bioinformatics (GCB 2017), Tübingen, Germany. doi:10.7287/peerj.preprints.3268v1. [PubMan] : Collenberg, M., Bemm, F., & Weigel, D. (2017). Transcriptome Analysis in Hybrid Plants using Platinum Genomes. Poster presented at German Conference on Bioinformatics (GCB 2017), Tübingen, Germany. doi:10.7287/peerj.preprints.3268v1. [PubMan] : Bemm, F., & The 1001 Genomes Consortium (2017). Understanding global patterns of structural variation in Arabidopsis thaliana: Future of the 1001 Genome project. Poster presented at German Conference on Bioinformatics (GCB 2017), Tübingen, Germany. doi:10.7287/peerj.preprints.3268v1. [PubMan] : Van de Weyer, A.-L., Bemm, F., Monteiro, F., Furzer, O., & Weigel, D. (2017). Species-wide spectrum of resistance genes in Arabidopsis thaliana. Poster presented at German Conference on Bioinformatics (GCB 2017), Tübingen, Germany. doi:10.7287/peerj.preprints.3268v1. [PubMan] : Bemm, F., Burleigh, L., Förster, F., Schmucki, R., Ebeling, M., Janzen, C., Dandekar, T., Schill, R., Certa, U., & Schultz, J. (submitted). Draft genome of the Eutardigrade Milnesium tardigradum sheds light on ecdysozoan evolution. [PubMan] : Jaleta, T., Zhou, S., Bemm, F., Schär, F., Khieu, V., Muth, S., Odermatt, P., Lok, J., & Streit, A. (2017). Different but overlapping populations of Strongyloides stercoralis in dogs and humans: Dogs as a possible source for zoonotic strongyloidiasis. PLoS Neglected Tropical Diseases, 11(8): e0005752. doi:10.1371/journal.pntd.0005752. [PubMan] : Jupe, F., Bemm, F., Michael, T., Rivkin, A., Huang, S., Kawakatsu, T., Sandoval, J., O'Malley, R., Weigel, D., & Ecker, J. (2017). Next Generation Arabidopsis Genomics. In Plant & Animal Genome XXV: BioNano Genomics Education Workshop. [PubMan] : Ankenbrand, M., Weber, L., Becker, D., Förster, F., & Bemm, F. (2016). TBro: visualization and management of de novo transcriptomes. Database: The Journal of Biological Databases and Curation, 2016: baw146. doi:10.1093/database/baw146. [PubMan]