Researcher Portfolio
Martinez-Goikoetxea, Mikel
Department Protein Evolution, Max Planck Institute for Biology Tübingen, Max Planck Society, Department Protein Evolution, Max Planck Institute for Developmental Biology, Max Planck Society
Researcher Profile
Position: Department Protein Evolution, Max Planck Institute for Biology Tübingen, Max Planck Society
Position: Department Protein Evolution, Max Planck Institute for Developmental Biology, Max Planck Society
Additional IDs: MPIB: mmartinez
ORCID: https://orcid.org/0000-0002-6698-1310
ORCID: https://orcid.org/0000-0002-6698-1310
Researcher ID: https://pure.mpg.de/cone/persons/resource/persons276832
Publications
: Martinez-Goikoetxea, M. (2025). CCfrag: Scanning folding potential of coiled-coil fragments with AlphaFold. Bioinformatics Advances, 54(1): vbae195. doi:10.1093/bioadv/vbae195. [PubMan] : Madaj, R., Martinez-Goikoetxea, M., Kaminski, K., Ludwiczak, J., & Dunin-Horkawicz, S. (2025). Applicability of AlphaFold2 in the modeling of dimeric, trimeric, and tetrameric coiled-coil domains. Protein Science, 34(1): e5244. doi:10.1002/pro.5244. [PubMan] : Martinez Goikoetxea, M. (2024). Old folds can learn new tricks: Alphafold-driven insights on coiled-coil structure. Poster presented at European RosettaCon 2024: Knowledge Transfer for Modern Protein Modeling and Design, Copenhagen, Denmark. [PubMan] : Fruet, C., Martinez-Goikoetxea, M., Merino, F., & Lupas, A. (2024). A computational model for lipid-anchored polysaccharide export by the outer-membrane protein GfcD. Biophysical Journal, 123(20), 3491-3499. doi:10.1016/j.bpj.2024.08.012. [PubMan] : Madaj, R., Martinez-Goikoetxea, M., Kaminski, K., Ludwiczak, J., & Dunin-Horkawicz, S. (submitted). Applicability of AlphaFold2 in the modelling of coiled-coil domains. [PubMan] : Martinez Goikoetxea, M. (2024). Computational Coiled-Coil Discovery and Modeling. PhD Thesis, Eberhard-Karls-Universität, Tübingen, Germany. [PubMan] : Martinez Goikoetxea, M., Madaj, R., Ludwiczak, J., Lupas, A., & Dunin-Horkawicz, S. (2023). Old folds can learn new tricks: Alphafold-driven insights on coiled-coil structure. Poster presented at 3D-BioInfo ICSB 3D-SIG ELIXIR Czech Republic Community Meeting in Structural Bioinformatics, Praha, Czech Republic. [PubMan] : Martinez-Goikoetxea, M., & Lupas, A. (2023). New protein families with hendecad coiled coils in the proteome of life. Journal of Structural Biology, 215(3): 108007. doi:10.1016/j.jsb.2023.108007. [PubMan] : Martinez-Goikoetxea, M., & Lupas, A. (2023). A conserved motif suggests a common origin for a group of proteins involved in the cell division of Gram-positive bacteria. PLoS One, 18(1): e0273136. doi:10.1371/journal.pone.0273136. [PubMan] : Lupas, A., Dunin-Horkawicz, S., Martinez-Goikoetxea, M., Hartmann, M., & Hernandez Alvarez, B. (2022). The structural diversity of natural coiled coils. In 8th Alpbach Workshop: Coiled Coil, Fibrous and Repeat Proteins (pp. 39). [PubMan] : Martinez-Goikoetxea, M., & Lupas, A. (2022). Here Be Coiled-Coil Dragons: Computational Search for New Hendecad Coiled Coils. In 8th Alpbach Workshop: Coiled Coil, Fibrous and Repeat Proteins (pp. 42). [PubMan]