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(Released ) Cacatoo: building, exploring, and sharing spatiallystructured models of biologic...

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Creators: van Dijk, Bram

Dates: Submitted: 2021-11-09 | Published Online: 2022-02-05 | Date issued: 2022

Genre: Journal Article

Files: 1 File

Locators: -

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: The Journal of Open Source Software

Volume / Issue: 7 (70)

Start / End Page: -

Sequence Number: 3948

Source Publ. Info: -
(Released ) Effects of radiation damage and inelastic scattering on single-particle imaging ...

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Creators: E, Juncheng; Stransky, Michal; Jurek, Zoltan; Fortmann-Grote, Carsten ...

Dates: Submitted: 2021-05-07 | Accepted: 2021-08-19 | Published Online: 2021-09-09 | Date issued: 2021

Genre: Journal Article

Files: 1 File

Locators: -

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Scientific Reports

Volume / Issue: 11

Start / End Page: -

Sequence Number: 17976

Source Publ. Info: London, UK : Nature Publishing Group
(Released ) SEEK - Data management complement for Electronic Lab Notebooks

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Creators: Fortmann-Grote, Carsten

Dates: Accepted: 2021-09-20 | Published Online: 2021 | Date issued: 2021

Genre: Talk

Files: 1 File

Locators: -

Publishing info: -

Event Title: Digital Workshop "Living with Electronic Laborato...

Source Genre: -

Source Title: -

Volume / Issue: -

Start / End Page: -

Sequence Number: -

Source Publ. Info: -
(Released ) Reproducible Science with Jupyter

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Creators: Fortmann-Grote, Carsten; Fangohr, Hans

Dates: Accepted: 2021-05-06 | Published Online: 2021 | Date issued: 2021

Genre: Talk

Files: 2 Files

Locators: 1 Locator

Publishing info: -

Event Title: 4. FDM Workshop 2021 "Kompetenz Forschungsdatenma...

Source Genre: -

Source Title: -

Volume / Issue: -

Start / End Page: -

Sequence Number: -

Source Publ. Info: -
(Released ) CancerSim: A cancer simulation package for python 3

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Creators: Opašić, Luka; Scott, Jacob G.; Traulsen, Arne; Fortmann-Grote, Carsten

Dates: Submitted: 2020-05-25 | Published Online: 2020-09-23

Genre: Journal Article

Files: 1 File

Locators: -

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: The Journal of Open Source Software

Volume / Issue: 5 (53)

Start / End Page: -

Sequence Number: 2436

Source Publ. Info: -
(Released ) VINYL: The VIrtual Neutron and x-raY Laboratory and its applications

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Creators: E, J. C.; Hafner, A.; Kluyver, T.; Bertelsen, M. ...

Dates: Published Online: 2020-08-21

Genre: Conference Paper

Files: 1 File

Locators: 1 Locator

Publishing info: -

Event Title: SPIE Optical Engineering + Applications 2020

Source Genre: Proceedings

Source Title: Advances in Computational Methods for X-Ray Optic...

Volume / Issue: 11493

Start / End Page: 190 - 200

Sequence Number: -

Source Publ. Info: SPIE
(Released ) Ecological scaffolding and the evolution of individuality

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Creators: Black, Andrew J.; Bourrat, Pierrick; Rainey, Paul B.

Dates: Submitted: 2019-06-07 | Accepted: 2019-12-17 | Published Online: 2020-02-10 | Date issued: 2020-03

Genre: Journal Article

Files: 1 File

Locators: 1 Locator

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Nature Ecology & Evolution

Volume / Issue: 4

Start / End Page: 426 - 436

Sequence Number: -

Source Publ. Info: London : Nature Publishing Group
(Released ) Recombination of virulence genes in divergent acidovorax avenae strains that inf...

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Creators: Zeng, Quan; Wang, Jie; Bertels, Frederic; Giordano, Paul R. ...

Dates: Date issued: 2017

Genre: Journal Article

Files: 1 File

Locators: 1 Locator

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Molecular Plant-Microbe Interactions

Volume / Issue: 30 (10)

Start / End Page: 813 - 828

Sequence Number: -

Source Publ. Info: St. Paul, MN : APS Press
(Released ) Discovering complete quasispecies in bacterial genomes

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Creators: Bertels, Frederic; Gokhale, Chaitanya S.; Traulsen, Arne

Dates: Submitted: 2017-02-13 | Accepted: 2017-06-08 | Published Online: 2017-06-19 | Date issued: 2017

Genre: Journal Article

Files: -

Locators: 1 Locator

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Genetics

Volume / Issue: 206 (4)

Start / End Page: 2149 - 2157

Sequence Number: -

Source Publ. Info: Genetics Society of America
(Released ) Studying the function of domesticated transposases in bacterial genomes

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Creators: Sontag, Melissa; Bertels, Frederic

Dates: Date issued: 2019

Genre: Thesis

Files: -

Locators: -

Publishing info: Kiel : Christian-Albrechts-Universität zu Kiel

Event Title: -

Source Genre: -

Source Title: -

Volume / Issue: -

Start / End Page: -

Sequence Number: -

Source Publ. Info: -
(Released ) Evolution of mating types in finite populations: the precarious advantage of bei...

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Creators: Czuppon, Peter; Rogers, David W.

Dates: Modified: 2019-06-28 | Submitted: 2019-04-04 | Accepted: 2019-09-03 | Published Online: 2019-09-22 | Date issued: 2019-11

Genre: Journal Article

Files: 1 File

Locators: 1 Locator

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Journal of Evolutionary Biology

Volume / Issue: 32 (11)

Start / End Page: 1290 - 1299

Sequence Number: -

Source Publ. Info: Basel, Switzerland : Birkhäuser
(Released ) Identification and characterization of domesticated bacterial transposases

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Creators: Bertels, Frederic; Gallie, Jenna; Rainey, Paul B.

Dates: Accepted: 2017-08-02 | Published Online: 2017-08-03 | Date issued: 2017

Genre: Journal Article

Files: 1 File

Locators: 1 Locator

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Genome Biology and Evolution

Volume / Issue: 9 (8)

Start / End Page: 2110 - 2121

Sequence Number: -

Source Publ. Info: Oxford University Press
(Released ) Predicting mutational routes to new adaptive phenotypes

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Creators: Lind, Peter A.; Libby, Eric; Herzog, Jenny; Rainey, Paul B.

Dates: Submitted: 2018-06-03 | Accepted: 2018-11-28 | Published Online: 2019-01-08 | Date issued: 2019

Genre: Journal Article

Files: 2 Files

Locators: 1 Locator

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: eLife

Volume / Issue: 8

Start / End Page: -

Sequence Number: e38822

Source Publ. Info: Cambridge : eLife Sciences Publications
(Released ) miComplete: weighted quality evaluation of assembled microbial genomes

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Creators: Hugoson, Eric; Lam, Wai Tin; Guy, Lionel

Dates: Modified: 2019-07-23 | Submitted: 2019-04-13 | Accepted: 2019-08-20 | Published Online: 2019-08-22 | Date issued: 2019-09

Genre: Journal Article

Files: 2 Files

Locators: 1 Locator

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Bioinformatics

Volume / Issue: -

Start / End Page: -

Sequence Number: btz664

Source Publ. Info: Oxford : Oxford University Press
(Released ) Spore-autonomous fluorescent protein expression identifies meiotic chromosome mi...

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Creators: Rogers, David W.; McConnell, Ellen; Ono, Jasmine; Greig, Duncan

Dates: Submitted: 2017-12-08 | Accepted: 2018-10-29 | Published Online: 2018-11-12 | Date issued: 2018-11-12

Genre: Journal Article

Files: 1 File

Locators: -

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: PLoS Biology

Volume / Issue: 16 (11)

Start / End Page: -

Sequence Number: e2005066

Source Publ. Info: San Francisco, California, US : Public Library of Science
(Released ) Parallel evolution of HIV-1 in a long-term experiment

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Creators: Bertels, Frederic; Leemann, Christine; Metzner, Karin J; Regoes, Roland

Dates: Submitted: 2018-12-12 | Accepted: 2019-06-22 | Published Online: 2019-07-04 | Date issued: 2019-11

Genre: Journal Article

Files: 1 File

Locators: 1 Locator

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Molecular Biology and Evolution

Volume / Issue: 36 (11)

Start / End Page: 2400 - 2414

Sequence Number: -

Source Publ. Info: Oxford : Oxford University Press
(Released ) Nascent multicellular life and the emergence of individuality

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Creators: De Monte, Silvia; Rainey, Paul B.

Dates: Published Online: 2014-04-04 | Date issued: 2014-04

Genre: Journal Article

Files: 1 File

Locators: -

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Journal of Biosciences

Volume / Issue: 39 (2)

Start / End Page: 237 - 248

Sequence Number: -

Source Publ. Info: Bangalore : Indian Academy of Sciences
(Released ) Experimental evolution reveals hidden diversity in evolutionary pathways

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Creators: Lind, Peter A.; Farr, Andrew D.; Rainey, Paul B.

Dates: Submitted: 2015-02-17 | Accepted: 2015-03-24 | Published Online: 2015-03-25 | Date issued: 2015

Genre: Journal Article

Files: 1 File

Locators: -

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: eLife

Volume / Issue: 4

Start / End Page: -

Sequence Number: 07074

Source Publ. Info: Cambridge : eLife Sciences Publications
(Released ) Molecular mechanisms of xylose utilization by Pseudomonas fluorescens: overlappi...

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Creators: Liu, Yunhao; Rainey, Paul B.; Zhang, Xue-Xian

Dates: Accepted: 2015-07-17 | Published Online: 2015-08-16 | Date issued: 2015-10

Genre: Journal Article

Files: 1 File

Locators: -

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Molecular Microbiology

Volume / Issue: 98 (3)

Start / End Page: 553 - 570

Sequence Number: -

Source Publ. Info: Oxford : Blackwell Science
(Released ) The effect of population structure on the rate of evolution

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Creators: Frean, Marcus; Rainey, Paul B.; Traulsen, Arne

Dates: Submitted: 2013-01-29 | Accepted: 2013-04-22 | Published Online: 2013-05-15 | Date issued: 2013-07-07

Genre: Journal Article

Files: 1 File

Locators: -

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Proceedings of the Royal Society B: Biological Sc...

Volume / Issue: 280 (1762)

Start / End Page: -

Sequence Number: 20130211

Source Publ. Info: London : Royal Society
(Released ) How the unicorn got its horn

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Creators: Hendrickson, Heather; Rainey, Paul B.

Dates: Published Online: 2012-09-19 | Date issued: 2012-09-27

Genre: Journal Article

Files: 1 File

Locators: -

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Nature

Volume / Issue: 489 (7417)

Start / End Page: 504 - 505

Sequence Number: -

Source Publ. Info: London : Nature Publishing Group
(Released ) Estimating the mutational fitness effects distribution during early HIV infectio...

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Creators: Bons, Eva; Bertels, Frederic; Regoes, Roland R

Dates: Published Online: 2018-10-04 | Date issued: 2018-07-01

Genre: Journal Article

Files: 1 File

Locators: 1 Locator

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Virus Evolution

Volume / Issue: 4 (2)

Start / End Page: -

Sequence Number: vey029

Source Publ. Info: UK : Oxford University Press
(Released ) The evolutionary emergence of stochastic phenotype switching in bacteria

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Creators: Rainey, Paul B.; Beaumont, Hubertus JE; Ferguson, Gayle C; Gallie, Jenna ...

Dates: Published Online: 2011-09-09

Genre: Conference Paper

Files: 1 File

Locators: -

Publishing info: -

Event Title: 10th Symposium on Lactic Acid Bacterium

Source Genre: Journal

Source Title: Microbial Cell Factories

Volume / Issue: 10 (Suppl. 1)

Start / End Page: -

Sequence Number: S 14

Source Publ. Info: BioMed Central, Proceedings
(Released ) The biosurfactant viscosin produced by Pseudomonas fluorescens SBW25 aids spread...

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Creators: Alsohim, Abdullah S.; Taylor, Tiffany B.; Barrett, Glyn A.; Gallie, Jenna ...

Dates: Modified: 2014-03-14 | Submitted: 2013-09-13 | Accepted: 2014-03-14 | Published Online: 2014-04-29 | Date issued: 2014-07

Genre: Journal Article

Files: 1 File

Locators: -

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Environmental Microbiology

Volume / Issue: 16 (7)

Start / End Page: 2267 - 2281

Sequence Number: -

Source Publ. Info: Oxford, England : Blackwell Science
(Released ) Role of the transporter-like sensor kinase CbrA in histidine uptake and signal t...

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Creators: Zhang, Xue-Xian; Gauntlett, Jonathan C.; Oldenburg, Darby G.; Cook, Gregory M. ...

Dates: Submitted: 2015-05-11 | Accepted: 2015-06-17 | Published Online: 2015-07-06 | Date issued: 2015-09

Genre: Journal Article

Files: 1 File

Locators: -

Publishing info: -

Event Title: -

Source Genre: Journal

Source Title: Journal of Bacteriology (Washington, DC)

Volume / Issue: 197 (17)

Start / End Page: 2867 - 2878

Sequence Number: -

Source Publ. Info: American Society for Microbiology (ASM)

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