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  Recent evolution of a TET-controlled and DPPA3/STELLA-driven pathway of passive DNA demethylation in mammals

Mulholland, C. B., Nishiyama, A., Ryan, J., Nakamura, R., Yigit, M., Glueck, I. M., et al. (2020). Recent evolution of a TET-controlled and DPPA3/STELLA-driven pathway of passive DNA demethylation in mammals. Nature Communications, 11(1): 5972. doi:10.1038/s41467-020-19603-1.

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https://www.nature.com/articles/s41467-020-19603-1#Sec42 (Ergänzendes Material)
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 Urheber:
Mulholland, Christopher B.1, Autor
Nishiyama, Atsuya1, Autor
Ryan, Joel1, Autor
Nakamura, Ryohei1, Autor
Yigit, Merve1, Autor
Glueck, Ivo M.1, Autor
Trummer, Carina1, Autor
Qin, Weihua1, Autor
Bartoschek, Michael D.1, Autor
Traube, Franziska R.1, Autor
Parsa, Edris1, Autor
Ugur, Enes2, Autor           
Modic, Miha1, Autor
Acharya, Aishwarya1, Autor
Stolz, Paul1, Autor
Ziegenhain, Christoph1, Autor
Wierer, Michael2, Autor           
Enard, Wolfgang1, Autor
Carell, Thomas1, Autor
Lamb, Don C.1, Autor
Takeda, Hiroyuki1, AutorNakanashi, Makoto1, AutorBultmann, Sebastian1, AutorLeonhardt, Heinrich1, Autor mehr..
Affiliations:
1external, ou_persistent22              
2Mann, Matthias / Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565159              

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Schlagwörter: EMBRYONIC STEM-CELLS; TRANSPOSABLE ELEMENTS; NAIVE PLURIPOTENCY; GROUND-STATE; ENDOGENOUS RETROVIRUSES; EXTRAEMBRYONIC LINEAGES; PREIMPLANTATION EMBRYOS; EPIGENETIC INHERITANCE; CHROMATIN ASSOCIATION; GENOMIC METHYLATIONScience & Technology - Other Topics;
 Zusammenfassung: Genome-wide DNA demethylation is a unique feature of mammalian development and naive pluripotent stem cells. Here, we describe a recently evolved pathway in which global hypomethylation is achieved by the coupling of active and passive demethylation. TET activity is required, albeit indirectly, for global demethylation, which mostly occurs at sites devoid of TET binding. Instead, TET-mediated active demethylation is locus-specific and necessary for activating a subset of genes, including the naive pluripotency and germline marker Dppa3 (Stella, Pgc7). DPPA3 in turn drives large-scale passive demethylation by directly binding and displacing UHRF1 from chromatin, thereby inhibiting maintenance DNA methylation. Although unique to mammals, we show that DPPA3 alone is capable of inducing global DNA demethylation in non-mammalian species (Xenopus and medaka) despite their evolutionary divergence from mammals more than 300 million years ago. Our findings suggest that the evolution of Dppa3 facilitated the emergence of global DNA demethylation in mammals. Active and passive demethylation pathways have been implicated in the genome-wide erasure of 5mC accompanying mammalian preimplantation development. Here the authors reveal a recently evolved, mammalian-specific pathway in which global hypomethylation is achieved by the coupling of active and passive demethylation.

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Sprache(n): eng - English
 Datum: 2020
 Publikationsstatus: Online veröffentlicht
 Seiten: 24
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: ISI: 000602959900018
DOI: 10.1038/s41467-020-19603-1
 Art des Abschluß: -

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Titel: Nature Communications
  Kurztitel : Nat. Commun.
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: London : Nature Publishing Group
Seiten: - Band / Heft: 11 (1) Artikelnummer: 5972 Start- / Endseite: - Identifikator: ISSN: 2041-1723
CoNE: https://pure.mpg.de/cone/journals/resource/2041-1723