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  Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences

Poznik, G. D., Xue, Y., Mendez, F. L., Willems, T. F., Massaia, A., Wilson Sayres, M. A., et al. (2016). Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences. Nature Genetics, 48(6), 593-599. doi:10.1038/ng.3559.

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© 2016 Macmillan Publishers Limited, part of Springer Nature
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Poznik, G. D., Autor
Xue, Y., Autor
Mendez, F. L., Autor
Willems, T. F., Autor
Massaia, A., Autor
Wilson Sayres, M. A., Autor
The 1000 Genomes Projekt, Consortium, Autor
Lehrach, H.1, Autor           
Sudbrak, R., Autor
Albrecht, M. W., Autor
Amstislavskiy, V.2, Autor           
Borodina, T. A., Autor
Lienhard, M.3, Autor           
Mertes, F.1, Autor           
Sultan, M., Autor
Timmermann, B.4, Autor           
Yaspo, M.-L.2, Autor           
Affiliations:
1Dept. of Vertebrate Genomics (Head: Hans Lehrach), Max Planck Institute for Molecular Genetics, Max Planck Society, ou_1433550              
2Gene Regulation and Systems Biology of Cancer (Marie-Laure Yaspo), Independent Junior Research Groups (OWL), Max Planck Institute for Molecular Genetics, Max Planck Society, ou_2117287              
3Bioinformatics (Ralf Herwig), Dept. of Computational Molecular Biology (Head: Martin Vingron), Max Planck Institute for Molecular Genetics, Max Planck Society, ou_1479648              
4Sequencing (Head: Bernd Timmermann), Scientific Service (Head: Christoph Krukenkamp), Max Planck Institute for Molecular Genetics, Max Planck Society, ou_1479670              

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 Zusammenfassung: We report the sequences of 1,244 human Y chromosomes randomly ascertained from 26 worldwide populations by the 1000 Genomes Project. We discovered more than 65,000 variants, including single-nucleotide variants, multiple-nucleotide variants, insertions and deletions, short tandem repeats, and copy number variants. Of these, copy number variants contribute the greatest predicted functional impact. We constructed a calibrated phylogenetic tree on the basis of binary single-nucleotide variants and projected the more complex variants onto it, estimating the number of mutations for each class. Our phylogeny shows bursts of extreme expansion in male numbers that have occurred independently among each of the five continental superpopulations examined, at times of known migrations and technological innovations.

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Sprache(n): eng - English
 Datum: 2016-04-252016-06
 Publikationsstatus: Erschienen
 Seiten: 7
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: -
 Identifikatoren: DOI: 10.1038/ng.3559
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Titel: Nature Genetics
  Andere : Nature Genet.
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: New York, NY : Nature America, Inc.
Seiten: - Band / Heft: 48 (6) Artikelnummer: - Start- / Endseite: 593 - 599 Identifikator: ISSN: 1061-4036
CoNE: https://pure.mpg.de/cone/journals/resource/954925598609