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  An in silico-in vitro pipeline identifying an HLA-A*02:01+ KRAS G12V+ spliced epitope candidate for a broad tumor-immune response in cancer patients.

Mishto, M., Mansurkhodzhaev, A., Ying, G., Bitra, A., Cordfunke, R. A., Henze, S., et al. (2019). An in silico-in vitro pipeline identifying an HLA-A*02:01+ KRAS G12V+ spliced epitope candidate for a broad tumor-immune response in cancer patients. Frontiers in Immunology, 10: 2572. doi:10.3389/fimmu.2019.02572.

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Mishto, M., Autor
Mansurkhodzhaev, A.1, Autor           
Ying, G., Autor
Bitra, A., Autor
Cordfunke, R. A., Autor
Henze, S., Autor
Paul, D., Autor
Sidney, J., Autor
Urlaub, H.2, Autor           
Neefjes, J., Autor
Sette, A., Autor
Zajonc, D. M., Autor
Liepe, J.1, Autor           
Affiliations:
1Research Group of Quantitative and System Biology, MPI for Biophysical Chemistry, Max Planck Society, ou_2466694              
2Research Group of Bioanalytical Mass Spectrometry, MPI for biophysical chemistry, Max Planck Society, ou_578613              

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Schlagwörter: KRAS; adoptive T cell therapy targets; antigen presentation; cancer epitopes; peptide splicing; proteasome; tumor immunology
 Zusammenfassung: Targeting CD8+ T cells to recurrent tumor-specific mutations can profoundly contribute to cancer treatment. Some of these mutations are potential tumor antigens although they can be displayed by non-spliced epitopes only in a few patients, because of the low affinity of the mutated non-spliced peptides for the predominant HLA class I alleles. Here, we describe a pipeline that uses the large sequence variety of proteasome-generated spliced peptides and identifies spliced epitope candidates, which carry the mutations and bind the predominant HLA-I alleles with high affinity. They could be used in adoptive T cell therapy and other anti-cancer immunotherapies for large cohorts of cancer patients. As a proof of principle, the application of this pipeline led to the identification of a KRAS G12V mutation-carrying spliced epitope candidate, which is produced by proteasomes, transported by TAPs and efficiently presented by the most prevalent HLA class I molecules, HLA-A*02:01 complexes.

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Sprache(n): eng - English
 Datum: 2019-11-152019
 Publikationsstatus: Erschienen
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 Ort, Verlag, Ausgabe: -
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 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.3389/fimmu.2019.02572
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Titel: Frontiers in Immunology
Genre der Quelle: Zeitschrift
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Seiten: 17 Band / Heft: 10 Artikelnummer: 2572 Start- / Endseite: - Identifikator: -