English
 
Help Privacy Policy Disclaimer
  Advanced SearchBrowse

Item

ITEM ACTIONSEXPORT
 
 
DownloadE-Mail
  Modeling RNA loops using sequence homology and geometric constraints

Schudoma, C., May, P., & Walther, D. (2010). Modeling RNA loops using sequence homology and geometric constraints. Bioinformatics, 26(13), 1671-1672. doi:10.1093/bioinformatics/btq236.

Item is

Files

show Files
hide Files
:
Schudoma-2010-Modeling RNA loops u.pdf (Any fulltext), 98KB
Name:
Schudoma-2010-Modeling RNA loops u.pdf
Description:
-
OA-Status:
Visibility:
Public
MIME-Type / Checksum:
application/pdf / [MD5]
Technical Metadata:
Copyright Date:
-
Copyright Info:
-
License:
-

Locators

show

Creators

show
hide
 Creators:
Schudoma, C.1, Author           
May, P.1, Author           
Walther, D.1, Author           
Affiliations:
1BioinformaticsCIG, Infrastructure Groups and Service Units, Max Planck Institute of Molecular Plant Physiology, Max Planck Society, ou_1753303              

Content

show
hide
Free keywords: database prediction
 Abstract: RNA loop regions are essential structural elements of RNA molecules influencing both their structural and functional properties. We developed RLooM, a web application for homology-based modeling of RNA loops utilizing template structures extracted from the PDB. RLooM allows the insertion and replacement of loop structures of a desired sequence into an existing RNA structure. Furthermore, a comprehensive database of loops in RNA structures can be accessed through the web interface.

Details

show
hide
Language(s): eng - English
 Dates: 2010
 Publication Status: Issued
 Pages: -
 Publishing info: -
 Table of Contents: -
 Rev. Type: -
 Identifiers: ISI: ISI:000278967500016
DOI: 10.1093/bioinformatics/btq236
ISSN: 1367-4803
URI: ://000278967500016 http://bioinformatics.oxfordjournals.org/content/26/13/1671.full.pdf
 Degree: -

Event

show

Legal Case

show

Project information

show

Source 1

show
hide
Title: Bioinformatics
Source Genre: Journal
 Creator(s):
Affiliations:
Publ. Info: -
Pages: - Volume / Issue: 26 (13) Sequence Number: - Start / End Page: 1671 - 1672 Identifier: -