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  Molecular dissection of step 2 catalysis of yeast pre-mRNA splicing investigated in a purified system.

Ohrt, T., Odenwälder, P., Dannenberg, J., Prior, M., Warkocki, Z., Schmitzova, J., et al. (2013). Molecular dissection of step 2 catalysis of yeast pre-mRNA splicing investigated in a purified system. RNA, 19(7), 902-915. doi:10.1261/rna.039024.113.

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 Urheber:
Ohrt, T.1, Autor           
Odenwälder, P.1, Autor           
Dannenberg, J.1, Autor           
Prior , M., Autor
Warkocki, Z.1, Autor           
Schmitzova, J.1, Autor           
Karaduman, R.1, Autor           
Gregor, I., Autor
Enderlein, J., Autor
Fabrizio, P.1, Autor           
Lührmann, R.1, Autor           
Affiliations:
1Department of Cellular Biochemistry, MPI for biophysical chemistry, Max Planck Society, ou_578576              

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Schlagwörter: spliceosome; step 2 catalysis; step 2 factors/Prp16; Slu7 Prp18; Prp22
 Zusammenfassung: Step 2 catalysis of pre-mRNA splicing entails the excision of the intron and ligation of the 5' and 3' exons. The tasks of the splicing factors Prp16, Slu7, Prp18, and Prp22 in the formation of the step 2 active site of the spliceosome and in exon ligation, and the timing of their recruitment, remain poorly understood. Using a purified yeast in vitro splicing system, we show that only the DEAH-box ATPase Prp16 is required for formation of a functional step 2 active site and for exon ligation. Efficient docking of the 3' splice site (3' SS) to the active site requires only Slu7/Prp18 but not Prp22. Spliceosome remodeling by Prp16 appears to be subtle as only the step 1 factor Cwc25 is dissociated prior to step 2 catalysis, with its release dependent on docking of the 3' SS to the active site and Prp16 action. We show by fluorescence cross-correlation spectroscopy that Slu7/Prp18 and Prp16 bind early to distinct, low-affinity binding sites on the step-1-activated B* spliceosome, which are subsequently converted into high-affinity sites. Our results shed new light on the factor requirements for step 2 catalysis and the dynamics of step 1 and 2 factors during the catalytic steps of splicing.

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Sprache(n): eng - English
 Datum: 2013-05-172013-07
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1261/rna.039024.113
 Art des Abschluß: -

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Titel: RNA
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: -
Seiten: - Band / Heft: 19 (7) Artikelnummer: - Start- / Endseite: 902 - 915 Identifikator: ISSN: 1355-8382