A bioinformatics approach to distinguish plant parasite and host transcriptomes 
in interface tissue by classifying RNA-Seq reads

Ikeue, Daisuke; Schudoma, C.; Zhang, W.; Ogata, Yoshiyuki; Sakamoto, Tomoaki; Kurata, Tetsuya; Furuhashi, Takeshi; Kragler, F.; Aoki, Koh

doi:10.1186/s13007-015-0066-6

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A bioinformatics approach to distinguish plant parasite and host transcriptomes in interface tissue by classifying RNA-Seq reads

Ikeue, D., Schudoma, C., Zhang, W., Ogata, Y., Sakamoto, T., Kurata, T., et al. (2015). A bioinformatics approach to distinguish plant parasite and host transcriptomes in interface tissue by classifying RNA-Seq reads. Plant Methods, 11: 34. doi:10.1186/s13007-015-0066-6.

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Item Permalink: https://hdl.handle.net/11858/00-001M-0000-0028-1C70-4 Version Permalink: https://hdl.handle.net/11858/00-001M-0000-002B-B492-1

Genre: Journal Article

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Creators:
Ikeue, Daisuke¹, Author
Schudoma, C.², Author
Zhang, W.³, Author
Ogata, Yoshiyuki¹, Author
Sakamoto, Tomoaki¹, Author
Kurata, Tetsuya¹, Author
Furuhashi, Takeshi¹, Author
Kragler, F.³, Author
Aoki, Koh¹, Author

Affiliations:
1external, ou_persistent22
2BioinformaticsCIG, Infrastructure Groups and Service Units, Max Planck Institute of Molecular Plant Physiology, Max Planck Society, ou_1753303
3Intercellular Macromolecular Transport, Department Stitt, Max Planck Institute of Molecular Plant Physiology, Max Planck Society, ou_1753331

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Language(s): eng - English

Dates: Date issued: 2015

Publication Status: Issued

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Identifiers: ISI: 000356847500001
DOI: 10.1186/s13007-015-0066-6

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Title: Plant Methods

Source Genre: Journal

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Publ. Info: BioMed Central

Pages: - Volume / Issue: 11 Sequence Number: 34 Start / End Page: - Identifier: ISSN: 1746-4811
CoNE: https://pure.mpg.de/cone/journals/resource/1000000000019420