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  Unrooted non-binary tree-based phylogenetic networks

Fischer, M., Herbst, L., Galla, M., Long, Y., & Wicke, K. (2021). Unrooted non-binary tree-based phylogenetic networks. Discrete applied mathematics, 294: 2021.01.005, pp. 10-30. doi:10.1016/j.dam.2021.01.005.

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 Urheber:
Fischer, Mareike, Autor
Herbst, Linda1, Autor           
Galla, Michelle, Autor
Long, Yangjing, Autor
Wicke, Kristina, Autor
Affiliations:
1tide, Max Planck Institute for the Science of Human History, Max Planck Society, ou_2591691              

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Schlagwörter: Phylogenetic tree, Phylogenetic network, Tree-based network, Level- network, Hamiltonian path
 Zusammenfassung: Phylogenetic networks are a generalization of phylogenetic trees allowing for the representation of non-treelike evolutionary events such as hybridization. Typically, such networks have been analyzed based on their ‘level’, i.e. based on the complexity of their 2-edge-connected components. However, recently the question of how ‘treelike’ a phylogenetic network is has become the center of attention in various studies. This led to the introduction of tree-based networks, i.e. networks that can be constructed from a phylogenetic tree, called the base tree, by adding additional edges. While the concept of tree-basedness was originally introduced for rooted phylogenetic networks, it has recently also been considered for unrooted networks. In the present study, we compare and contrast findings obtained for unrooted binary tree-based networks to unrooted non-binary networks. In particular, while it is known that up to level 4 all unrooted binary networks are tree-based, we show that in the case of non-binary networks, this result only holds up to level 3.

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Sprache(n): eng - English
 Datum: 2021-02-122021-05-15
 Publikationsstatus: Erschienen
 Seiten: 21
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: 1. Introduction
2. Preliminaries
2.1. Phylogenetic concepts
-- Phylogenetic networks
-- Edge subdivision and vertex suppression
-- Tree-based networks
-- Cut edges/vertices, blobs, level-and proper networks
2.2. Graph-theoretical concepts
3. Results
3.1. Basic results
3.2. Unrooted non-binary tree-based networks
3.3. Unrooted binary tree-based networks
4. Discussion
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1016/j.dam.2021.01.005
Anderer: shh2847
 Art des Abschluß: -

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Titel: Discrete applied mathematics
Genre der Quelle: Zeitschrift
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Affiliations:
Ort, Verlag, Ausgabe: Amsterdam : North-Holland
Seiten: - Band / Heft: 294 Artikelnummer: 2021.01.005 Start- / Endseite: 10 - 30 Identifikator: ISSN: 0166-218X
CoNE: https://pure.mpg.de/cone/journals/resource/954925482629