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  Unravelling the zinc finger diversity of recombination regulator PRDM9 in minke whales (Balaenoptera)

Kovalchuk, E. (2018). Unravelling the zinc finger diversity of recombination regulator PRDM9 in minke whales (Balaenoptera). Master Thesis, Christian-Albrechts-Universität zu Kiel, Kiel.

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アイテムのパーマリンク: https://hdl.handle.net/21.11116/0000-0002-FCDE-9 版のパーマリンク: https://hdl.handle.net/21.11116/0000-0005-1F6D-0
資料種別: 学位論文

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Kovalchuk_Masterarbeit_2018.pdf (全文テキスト(全般)), 4MB
 
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 作成者:
Kovalchuk, Elena1, 著者           
Roeder, Thomas, 監修者
Tautz, Diethard2, 監修者           
Odenthal-Hesse, Linda1, 学位論文主査           
所属:
1Research Group Meiotic Recombination and Genome Instability, Department Evolutionary Genetics, Max Planck Institute for Evolutionary Biology, Max Planck Society, ou_2355693              
2Department Evolutionary Genetics, Max Planck Institute for Evolutionary Biology, Max Planck Society, ou_1445635              

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言語: eng - English
 日付: 2018-03-252018-03-25
 出版の状態: 出版
 ページ: v, 50
 出版情報: Kiel : Christian-Albrechts-Universität zu Kiel
 目次: Table of Contents
Affirmation .......................................................................................................................... i
Table of Contents .............................................................................................................. ii
Index of Figures.................................................................................................................iv
Index of Tables ..................................................................................................................iv
Index of Abbreviations ....................................................................................................... v
1 Introduction ................................................................................................................ 1
1.1 PRDM9 .............................................................................................................. 1
1.1.1 PRDM9 in Mus musculus ............................................................................... 2
1.1.2 PRDM9 in Humans ........................................................................................ 4
1.1.3 PRDM9 in non-human Primates ..................................................................... 4
1.1.4 PRDM9 in Ruminants ..................................................................................... 5
1.1.5 PRDM9 in Equidae ......................................................................................... 6
1.2 Balaenoptera Acutorostrata ............................................................................... 7
1.3 Objective .......................................................................................................... 10
2 Materials and Methods ............................................................................................ 11
2.1 B.acutorostrata DNA Samples ......................................................................... 11
2.2 STR genotyping ............................................................................................... 12
2.3 Mitochondrial DLoop Sequencing .................................................................... 13
2.4 PRDM9-ZNF Typing ........................................................................................ 14
3 Results .................................................................................................................... 15
3.1 mtD-Loop Sequencing ..................................................................................... 15
3.2 Microsatellite Analysis ...................................................................................... 17
3.3 PRDM9 Zinc Finger PCR ................................................................................. 19
3.4 PRDM9 Zinc Finger Typing .............................................................................. 20
3.5 Characterising the PRDM9 ZNF Array ............................................................. 21
3.6 In silico C2H2 ZNF binding predictions .............................................................. 22
4 Discussion ............................................................................................................... 24
5 References .............................................................................................................. 31
6 Appendix ................................................................................................................. 37
6.1 Sequences of the used primers........................................................................ 37
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 識別子(DOI, ISBNなど): その他: Dipl/13106
その他: Dipl/13179
 学位: 修士号 (Master)

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