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  Phylogenetic and functional marker genes to study ammonia-oxidizing microorganisms (AOM) in the environment

Junier, P., Molina, V., Dorador, C., Hadas, O., Kim, O.-S., Junier, T., et al. (2009). Phylogenetic and functional marker genes to study ammonia-oxidizing microorganisms (AOM) in the environment. Applied Microbiology and Biotechnology, 85(3), 425-440. doi:10.1007/s00253-009-2228-9.

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Junier, Pilar1, Autor           
Molina, Verónica1, Autor           
Dorador, Cristina1, Autor           
Hadas, Ora1, Autor           
Kim, Ok-Sun1, Autor           
Junier, Thomas, Autor
Witzel, Karl-Paul1, Autor           
Imhoff, Johannes F., Autor
Affiliations:
1Department Ecophysiology, Max Planck Institute for Limnology, Max Planck Institute for Evolutionary Biology, Max Planck Society, ou_976547              

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Schlagwörter: AOB; AOA; Anammox; functional marker; phylogenetic marker
 Zusammenfassung: The oxidation of ammonia plays a significant role in the transformation of fixed nitrogen in the global nitrogen cycle. Autotrophic ammonia oxidation is known in three groups of microorganisms. Aerobic ammonia-oxidizing bacteria and archaea convert ammonia into nitrite during nitrification. Anaerobic ammonia-oxidizing bacteria (anammox) oxidize ammonia using nitrite as electron acceptor and producing atmospheric dinitrogen. The isolation and cultivation of all three groups in the laboratory are quite problematic due to their slow growth rates, poor growth yields, unpredictable lag phases, and sensitivity to certain organic compounds. Culture-independent approaches have contributed importantly to our understanding of the diversity and distribution of these microorganisms in the environment. In this review, we present an overview of approaches that have been used for the molecular study of ammonia oxidizers and discuss their application in different environments.

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Sprache(n): eng - English
 Datum: 2009-09-24
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
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 Identifikatoren: eDoc: 445908
DOI: 10.1007/s00253-009-2228-9
Anderer: 2736/S 39059
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Titel: Applied Microbiology and Biotechnology
  Alternativer Titel : Appl Microbiol Biotechnol
Genre der Quelle: Zeitschrift
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Seiten: - Band / Heft: 85 (3) Artikelnummer: - Start- / Endseite: 425 - 440 Identifikator: ISSN: 0175-7598 (print)
ISSN: 1432-0614 (online)