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  Navigation inside a protease: Substrate selection and product exit in the tricorn protease from Thermoplasma acidophilum

Kim, J. S., Groll, M., Musiol, H.-J., Behrendt, R., Kaiser, M., Moroder, L., et al. (2002). Navigation inside a protease: Substrate selection and product exit in the tricorn protease from Thermoplasma acidophilum. Journal of Molecular Biology, 324(5), 1041-1050.

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Genre: Zeitschriftenartikel
Alternativer Titel : J. Mol. Biol.

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 Urheber:
Kim, J. S.1, Autor           
Groll, M.1, Autor           
Musiol, H.-J.2, Autor           
Behrendt, R.2, Autor           
Kaiser, M.2, Autor           
Moroder, L.2, Autor           
Huber, R.1, Autor           
Brandstetter, H.1, Autor           
Affiliations:
1Huber, Robert / Structure Research, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565155              
2Moroder, Luis / Bioorganic Chemistry, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565160              

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Schlagwörter: crystal structure; enzymatic mechanism; hydrolase; beta- propeller; tricorn protease
 Zusammenfassung: The proposed pathway and mechanism of substrate entry and product egress in the hexameric D3 symmetric tricorn protease from Thermoplasma acidophilum were explored by crystallographic studies of ligand complexes and by structure-based mutagenesis. Obstruction of the pore within the 7-bladed beta-propeller (beta7) domain by alkylation or oxidation of an engineered double cysteine mutant strongly decreased enzymatic activities. In line herewith, the crystal structure of the tricorn protease in complex with a trideca-peptide inhibitor modifying the catalytic Ser965 revealed part of the peptide trapped inside the channel of the beta7 domain. The cysteine mutation widening the lumen of the 6-bladed beta-propeller (beta6) domain enhanced catalytic activity, which was restored to normal values after its alkylation. A charge reversal mutant at the putative anchor site of the substrate C terminus, R131E-R132E, drastically reduced the proteolytic activity. The complex crystal structure of a peptide inhibitor with a diketo group at the cleavage site mapped the substrate recognition site and confirmed the role of Arg131-Arg132 as an anchor site. Our results strongly suggest the wider beta7 domain to serve as a selective filter and guide of the substrate to the sequestered active site, while the narrower beta6 domain routes the product to the surface. Moreover, we identified the role of Arg131- Arg132 in anchoring the substrate C terminus. (C) 2002 Elsevier Science Ltd. All rights reserved.

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Sprache(n): eng - English
 Datum: 2002-12-13
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: eDoc: 34902
ISI: 000179960200012
 Art des Abschluß: -

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Titel: Journal of Molecular Biology
  Alternativer Titel : J. Mol. Biol.
Genre der Quelle: Zeitschrift
 Urheber:
Affiliations:
Ort, Verlag, Ausgabe: -
Seiten: - Band / Heft: 324 (5) Artikelnummer: - Start- / Endseite: 1041 - 1050 Identifikator: ISSN: 0022-2836