English
 
User Manual Privacy Policy Disclaimer Contact us
  Advanced SearchBrowse

Item

ITEM ACTIONSEXPORT
  Minimum information requested in the annotation of biochemical models (MIRIAM)

Le Novère, N., Finney, A., Hucka, M., Bhalla, U. S., Campagne, F., Collado-Vides, J., et al. (2005). Minimum information requested in the annotation of biochemical models (MIRIAM). Nature Biotechnology, 23(12), 1509-1515. doi:10.1038/nbt1156.

Item is

Basic

show hide
Item Permalink: http://hdl.handle.net/11858/00-001M-0000-0010-853F-C Version Permalink: http://hdl.handle.net/11858/00-001M-0000-0010-8540-6
Genre: Journal Article
Alternative Title : Nat Biotechnol

Files

show Files
hide Files
:
Le Novere et al. - Nat Biotech.pdf (Any fulltext), 212KB
Name:
Le Novere et al. - Nat Biotech.pdf
Description:
-
Visibility:
Public
MIME-Type / Checksum:
application/pdf / [MD5]
Technical Metadata:
Copyright Date:
-
Copyright Info:
eDoc_access: PUBLIC
License:
-

Locators

show

Creators

show
hide
 Creators:
Le Novère, Nicolas, Author
Finney, Andrew, Author
Hucka, Michael, Author
Bhalla, Upinder S., Author
Campagne, Fabien, Author
Collado-Vides, Julio, Author
Crampin, Edmund J., Author
Halstead, Matt, Author
Klipp, Edda1, Author              
Mendes, Pedro, Author
Nielsen, Poul, Author
Sauro, Herbert, Author
Shapiro, Bruce, Author
Snoep, Jacky L., Author
Spence, Hugh D., Author
Wanner, Barry L., Author
Affiliations:
1Independent Junior Research Groups (OWL), Max Planck Institute for Molecular Genetics, Max Planck Society, ou_1433554              

Content

show
hide
Free keywords: -
 Abstract: Most of the published quantitative models in biology are lost for the community because they are either not made available or they are insufficiently characterized to allow them to be reused. The lack of a standard description format, lack of stringent reviewing and authors' carelessness are the main causes for incomplete model descriptions. With today's increased interest in detailed biochemical models, it is necessary to define a minimum quality standard for the encoding of those models. We propose a set of rules for curating quantitative models of biological systems. These rules define procedures for encoding and annotating models represented in machine-readable form. We believe their application will enable users to (i) have confidence that curated models are an accurate reflection of their associated reference descriptions, (ii) search collections of curated models with precision, (iii) quickly identify the biological phenomena that a given curated model or model constituent represents and (iv) facilitate model reuse and composition into large subcellular models.

Details

show
hide
Language(s): eng - English
 Dates: 2005-12-06
 Publication Status: Published in print
 Pages: -
 Publishing info: -
 Table of Contents: -
 Rev. Method: -
 Identifiers: eDoc: 272389
DOI: 10.1038/nbt1156
 Degree: -

Event

show

Legal Case

show

Project information

show

Source 1

show
hide
Title: Nature Biotechnology
  Alternative Title : Nat Biotechnol
Source Genre: Journal
 Creator(s):
Affiliations:
Publ. Info: -
Pages: - Volume / Issue: 23 (12) Sequence Number: - Start / End Page: 1509 - 1515 Identifier: ISSN: 1087-0156