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  Identification of C. elegans DAF-12-binding sites, response elements, and target genes

Shostak, Y., Van Gilst, M. R., Antebi, A., & Yamamoto, K. R. (2004). Identification of C. elegans DAF-12-binding sites, response elements, and target genes. Genes & Development, 18(20), 2529-2544. doi:10.1101/gad.1218504.

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Genre: Zeitschriftenartikel
Alternativer Titel : Genes Dev

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Shostak, Yuriy, Autor
Van Gilst, Marc R., Autor
Antebi, Adam1, Autor           
Yamamoto, Keith R., Autor
Affiliations:
1Independent Junior Research Groups (OWL), Max Planck Institute for Molecular Genetics, Max Planck Society, ou_1433554              

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Schlagwörter: DAF-12; In Vitro Genomic Selection; intracellular receptor; response element; target genes
 Zusammenfassung: Intracellular receptor DAF-12 regulates dauer formation and developmental age and affects Caenorhabditis elegans lifespan. Genetic analyses place DAF-12 at the convergence of several signal transduction pathways; however, the downstream effectors and the molecular basis for the receptor's multiple physiological outputs are unknown. Beginning with C. elegans genomic DNA, we devised a procedure for multiple rounds of selection and amplification that yielded fragments bearing DAF-12-binding sites. These genomic fragments mediated DAF-12-dependent transcriptional regulation both in Saccharomyces cerevisiae and in C. elegans; that is, they served as functional DAF-12 response elements. We determined that most of the genomic fragments that displayed DAF-12 response element activity in yeast were linked to genes that were regulated by DAF-12 in C. elegans; indeed, the response element-containing fragments typically resided within clusters of DAF-12-regulated genes. DAF-12 target gene regulation was developmental program and stage specific, potentially predicting a fit of these targets into regulatory networks governing aspects of C. elegans reproductive development and dauer formation.

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Sprache(n): eng - English
 Datum: 2004-10-15
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: -
 Identifikatoren: eDoc: 228481
DOI: 10.1101/gad.1218504
 Art des Abschluß: -

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Titel: Genes & Development
  Alternativer Titel : Genes Dev
Genre der Quelle: Zeitschrift
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Affiliations:
Ort, Verlag, Ausgabe: -
Seiten: - Band / Heft: 18 (20) Artikelnummer: - Start- / Endseite: 2529 - 2544 Identifikator: ISSN: 0890-9369