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  A gene expression map of Arabidopsis development

Schmid, M., Davison, T. S., Henz, S. R., Pape, U. J., Demar, M., Vingron, M., et al. (n.d.). A gene expression map of Arabidopsis development. Nature Genetics, 37(5), 501-193. doi:10.1038/ng1543.

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Item Permalink: http://hdl.handle.net/11858/00-001M-0000-0010-8CE3-D Version Permalink: http://hdl.handle.net/11858/00-001M-0000-0010-8CE4-B
Genre: Journal Article
Alternative Title : Nat Genet

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 Creators:
Schmid, Markus1, Author
Davison, Timothy S.1, Author
Henz, Stefan R.1, Author
Pape, Utz J.2, Author              
Demar, Monika1, Author
Vingron, Martin3, Author              
Schoelkopf, Bernhard1, Author
Weigel, Detlef1, Author
Lohmann, Jan U.1, Author
Affiliations:
1Max Planck Society, ou_persistent13              
2Dept. of Computational Molecular Biology (Head: Martin Vingron), Max Planck Institute for Molecular Genetics, Max Planck Society, ou_1433547              
3Gene regulation (Martin Vingron), Dept. of Computational Molecular Biology (Head: Martin Vingron), Max Planck Institute for Molecular Genetics, Max Planck Society, ou_1479639              

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 Abstract: Regulatory regions of plant genes tend to be more compact than those of animal genes, but the complement of transcription factors encoded in plant genomes is as large or larger than that found in those of animals1. Plants therefore provide an opportunity to study how transcriptional programs control multicellular development. We analyzed global gene expression during development of the reference plant Arabidopsis thaliana in samples covering many stages, from embryogenesis to senescence, and diverse organs. Here, we provide a first analysis of this data set, which is part of the AtGenExpress expression atlas. We observed that the expression levels of transcription factor genes and signal transduction components are similar to those of metabolic genes. Examining the expression patterns of large gene families, we found that they are often more similar than would be expected by chance, indicating that many gene families have been co-opted for specific developmental processes.

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Language(s): eng - English
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 Identifiers: eDoc: 268498
DOI: 10.1038/ng1543
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Title: Nature Genetics
  Alternative Title : Nat Genet
Source Genre: Journal
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Pages: - Volume / Issue: 37 (5) Sequence Number: - Start / End Page: 501 - 193 Identifier: ISSN: 1061-4036