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  An Integrated Genomics Approach to Define Niche Establishment by Rhodococcus fascians

Depuydt, S., Trenkamp, S., Fernie, A. R., Elftieh, S., Renou, J. P., Vuylsteke, M., Holsters, M., & Vereecke, D. (2009). An Integrated Genomics Approach to Define Niche Establishment by Rhodococcus fascians. Plant Physiology, 149(3), 1366-1386. doi:10.1104/pp.108.131805.

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資料種別: Review Article

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Depuydt-2009-An Integrated Genomi.pdf (全文テキスト(全般)), 5MB
ファイルのパーマリンク:
https://hdl.handle.net/11858/00-001M-0000-0014-25FB-6
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Depuydt-2009-An Integrated Genomi.pdf
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application/pdf / [MD5]
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 作成者:
Depuydt, S.1, 著者
Trenkamp, S.2, 著者           
Fernie, A. R.2, 著者           
Elftieh, S.1, 著者
Renou, J. P.1, 著者
Vuylsteke, M.1, 著者
Holsters, M.1, 著者
Vereecke, D.1, 著者
所属:
1External Organizations, ou_persistent22              
2Central Metabolism, Department Willmitzer, Max Planck Institute of Molecular Plant Physiology, Max Planck Society, ou_1753339              

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キーワード: plant-pathogen interactions leafy gall formation arabidopsis-thaliana carbohydrate-metabolism defense responses gene-expression powdery mildew plasmodiophora-brassicae differential regulation signal-transduction
 要旨: Rhodococcus fascians is a Gram-positive phytopathogen that induces shooty hyperplasia on its hosts through the secretion of cytokinins. Global transcriptomics using microarrays combined with profiling of primary metabolites on infected Arabidopsis (Arabidopsis thaliana) plants revealed that this actinomycete modulated pathways to convert its host into a niche. The transcript data demonstrated that R. fascians leaves a very characteristic mark on Arabidopsis with a pronounced cytokinin response illustrated by the activation of cytokinin perception, signal transduction, and homeostasis. The microarray data further suggested active suppression of an oxidative burst during the R. fascians pathology, and comparison with publicly available transcript data sets implied a central role for auxin in the prevention of plant defense activation. Gene Ontology categorization of the differentially expressed genes hinted at a significant impact of infection on the primary metabolism of the host, which was confirmed by subsequent metabolite profiling. The much higher levels of sugars and amino acids in infected plants are presumably accessed by the bacteria as carbon and nitrogen sources to support epiphytic and endophytic colonization. Hexoses, accumulating from a significantly increased invertase activity, possibly inhibited the expression of photosynthesis genes and photosynthetic activity in infected leaves. Altogether, these changes are indicative of sink development in symptomatic tissues. The metabolomics data furthermore point to the possible occurrence of secondary signaling during the interaction, which might contribute to symptom development. These data are placed in the context of regulation of bacterial virulence gene expression, suppression of defense, infection phenotype, and niche establishment.

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言語: eng - English
 日付: 2009-01-022009
 出版の状態: 出版
 ページ: -
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 目次: -
 査読: -
 識別子(DOI, ISBNなど): ISI: ISI:000263843700014
DOI: 10.1104/pp.108.131805
ISSN: 0032-0889 (Print)0032-0889 (Linking)
URI: ://000263843700014http://www.jstor.org/stable/pdfplus/40537722.pdf
 学位: -

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出版物 1

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出版物名: Plant Physiology
  その他 : Plant Physiol.
種別: 学術雑誌
 著者・編者:
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出版社, 出版地: Bethesda, Md. : American Society of Plant Biologists
ページ: - 巻号: 149 (3) 通巻号: - 開始・終了ページ: 1366 - 1386 識別子(ISBN, ISSN, DOIなど): ISSN: 0032-0889
CoNE: https://pure.mpg.de/cone/journals/resource/991042744294438