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  IIntron positions in actin genes seem unrelated to the secondary structure of the protein

Weber, K., & Kabsch, W. (1994). IIntron positions in actin genes seem unrelated to the secondary structure of the protein. EMBO Journal, 13(6), 1280-1286. doi:10.1002/j.1460-2075.1994.tb06380.x.

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Item Permalink: https://hdl.handle.net/11858/00-001M-0000-0019-A98E-6 Version Permalink: https://hdl.handle.net/11858/00-001M-0000-002D-B2CA-B
Genre: Journal Article

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 Creators:
Weber, K., Author
Kabsch, Wolfgang1, 2, Author           
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1Emeritus Group Biophysics, Max Planck Institute for Medical Research, Max Planck Society, ou_1497712              
2Department of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Max Planck Society, ou_1497700              

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 Abstract: A catalogue of intron positions along the coding sequence was assembled from the large number of actin genes known for different eukaryotes. 36 positions in the amino acid sequence were compared with the known three-dimensional structure of actin. At least 20 but not more than 23 intron positions are at the start or end of a secondary structural element (beta-strand, alpha-helix or 3/10 helix) while eight positions interrupt such an element. Statistical analysis shows that due to the large number of end positions the boundaries of secondary structural elements are not correlated with the intron positions. In addition, the observed intron pattern seems compatible with the null hypothesis, i.e. intron positions are randomly distributed along the actin sequence.

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Language(s): eng - English
 Dates: 1993-11-191994-03-151994-03
 Publication Status: Issued
 Pages: 7
 Publishing info: -
 Table of Contents: -
 Rev. Type: Peer
 Identifiers: eDoc: 666762
DOI: 10.1002/j.1460-2075.1994.tb06380.x
URI: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC394942/
Other: 4122
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Title: EMBO Journal
  Other : EMBO J.
Source Genre: Journal
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Publ. Info: Nature Publishing Group
Pages: - Volume / Issue: 13 (6) Sequence Number: - Start / End Page: 1280 - 1286 Identifier: ISSN: 0261-4189
CoNE: https://pure.mpg.de/cone/journals/resource/954925497061