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  Reconstruction of the human cerebral cortex robust to white matter lesions: Method and validation

Shiee, N., Bazin, P.-L., Cuzzocreo, J. L., Ye, C., Kishore, B., Carass, A., et al. (2014). Reconstruction of the human cerebral cortex robust to white matter lesions: Method and validation. Human Brain Mapping, 35(7), 3385-3401. doi:10.1002/hbm.22409.

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 Creators:
Shiee, Navid1, 2, Author
Bazin, Pierre-Louis3, 4, Author              
Cuzzocreo, Jennifer L.1, Author
Ye, Chuyang1, Author
Kishore, Bhaskar1, Author
Carass, Aaron1, Author
Calabresi, Peter A.5, Author
Reich, Daniel S.5, 6, Author
Prince, Jerry L.1, Author
Pham, Dzung L.1, 2, Author
Affiliations:
1Image Analysis and Communication Laboratory, Department of Electrical and Computer Engineering, Johns Hopkins University, Baltimore, MD, USA, ou_persistent22              
2Center for Neuroscience and Regenerative Medicine, Henry M. Jackson Foundation for Advancement of Military Medicine, Bethesda, MD, USA, ou_persistent22              
3Department Neurophysics, MPI for Human Cognitive and Brain Sciences, Max Planck Society, ou_persistent22              
4Department Neurology, MPI for Human Cognitive and Brain Sciences, Max Planck Society, Leipzig, DE, ou_634549              
5Department of Neurology, Johns Hopkins University, Baltimore, MD, USA, ou_persistent22              
6Neuroimmunology Branch, National Institute of Neurological Disorders and Stroke, Bethesda, MD, USA, ou_persistent22              

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Free keywords: Cortical reconstruction; WM lesions; Multiple sclerosis; Lesion segmentation; Cortical thickness
 Abstract: Cortical atrophy has been reported in a number of diseases, such as multiple sclerosis and Alzheimer's disease, that are also associated with white matter (WM) lesions. However, most cortical reconstruction techniques do not account for these pathologies, thereby requiring additional processing to correct for the effect of WM lesions. In this work, we introduce CRUISE+, an automated process for cortical reconstruction from magnetic resonance brain images with WM lesions. The process extends previously well validated methods to allow for multichannel input images and to accommodate for the presence of WM lesions. We provide new validation data and tools for measuring the accuracy of cortical reconstruction methods on healthy brains as well as brains with multiple sclerosis lesions. Using this data, we validate the accuracy of CRUISE+ and compare it to another state-of-the-art cortical reconstruction tool. Our results demonstrate that CRUISE+ has superior performance in the cortical regions near WM lesions, and similar performance in other regions.

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Language(s): eng - English
 Dates: 2013-09-092013-09-152013-12-312014-07
 Publication Status: Published in print
 Pages: -
 Publishing info: -
 Table of Contents: -
 Rev. Type: Peer
 Identifiers: DOI: 10.1002/hbm.22409
PMID: 24382742
PMC: PMC4055590
Other: Epub 2013
 Degree: -

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Title: Human Brain Mapping
Source Genre: Journal
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Publ. Info: New York : Wiley-Liss
Pages: - Volume / Issue: 35 (7) Sequence Number: - Start / End Page: 3385 - 3401 Identifier: ISSN: 1065-9471
CoNE: https://pure.mpg.de/cone/journals/resource/954925601686