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  TakeTwo: an indexing algorithm suited to still images with known crystal parameters

Ginn, H. M., Roedig, P., Kuo, A., Evans, G., Sauter, N. K., Ernst, O., Meents, A., Müller-Werkmeister, H., Miller, R. J. D., & Stuart, D. I. (2016). TakeTwo: an indexing algorithm suited to still images with known crystal parameters. Acta Crystallographica Section D: Structural Biology, 72(8), 956-965. doi:10.1107/S2059798316010706.

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資料種別: 学術論文

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rr5128.pdf (出版社版), 2MB
ファイルのパーマリンク:
https://hdl.handle.net/11858/00-001M-0000-002B-1D35-F
ファイル名:
rr5128.pdf
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-
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公開
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application/pdf / [MD5]
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著作権日付:
2016
著作権情報:
© H. M. Ginn et al.

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 作成者:
Ginn, Helen Mary1, 2, 著者
Roedig, Philip3, 著者
Kuo, Anling4, 著者
Evans, Gwyndaf2, 著者
Sauter, Nicholas K.5, 著者
Ernst, Oliver4, 6, 著者
Meents, Alke3, 著者
Müller-Werkmeister, Henrike4, 7, 8, 著者           
Miller, R. J. Dwayne7, 8, 9, 著者           
Stuart, David Ian1, 2, 著者
所属:
1Division of Structural Biology, Wellcome Trust Centre for Human Genetics, Roosevelt Drive, Oxford OX3 7BN, England, ou_persistent22              
2Diamond House, Harwell Science and Innovation Campus, Fermi Avenue, Didcot OX11 0QX, England, ou_persistent22              
3Deutsches Elektronen-Synchrotron, Notkestrasse 85, 22607 Hamburg, Germany, ou_persistent22              
4Department of Biochemistry, University of Toronto, King’s College Circle, Toronto, ON M5S 1A8, Canada, ou_persistent22              
5Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA, ou_persistent22              
6Department of Molecular Genetics, University of Toronto, King’s College Circle, Toronto, ON M5S 1A8, Canada, ou_persistent22              
7Miller Group, Atomically Resolved Dynamics Department, Max Planck Institute for the Structure and Dynamics of Matter, Max Planck Society, ou_1938288              
8Departments of Physics and Chemistry, University of Toronto, 80 St George Street, Toronto, ON M5S 1H6, Canada, ou_persistent22              
9Hamburg Centre for Ultrafast Imaging, University of Hamburg, Hamburg, Germany, ou_persistent22              

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キーワード: TakeTwo; data processing; serial crystallography; XFELs; X-ray free-electron lasers
 要旨: The indexing methods currently used for serial femtosecond crystallography were originally developed for experiments in which crystals are rotated in the X-ray beam, providing significant three-dimensional information. On the other hand, shots from both X-ray free-electron lasers and serial synchrotron crystallo­graphy experiments are still images, in which the few three-dimensional data available arise only from the curvature of the Ewald sphere. Traditional synchrotron crystallography methods are thus less well suited to still image data processing. Here, a new indexing method is presented with the aim of maximizing information use from a still image given the known unit-cell dimensions and space group. Efficacy for cubic, hexagonal and orthorhombic space groups is shown, and for those showing some evidence of diffraction the indexing rate ranged from 90% (hexagonal space group) to 151% (cubic space group). Here, the indexing rate refers to the number of lattices indexed per image.

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言語: eng - English
 日付: 2016-05-192016-07-012016-07-28
 出版の状態: オンラインで出版済み
 ページ: 10
 出版情報: -
 目次: -
 査読: 査読あり
 識別子(DOI, ISBNなど): DOI: 10.1107/S2059798316010706
 学位: -

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出版物 1

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出版物名: Acta Crystallographica Section D: Structural Biology
  省略形 : Acta Cryst. D
種別: 学術雑誌
 著者・編者:
所属:
出版社, 出版地: Chester, England : International Union of Crystallography
ページ: - 巻号: 72 (8) 通巻号: - 開始・終了ページ: 956 - 965 識別子(ISBN, ISSN, DOIなど): ISSN: 2059-7983
CoNE: https://pure.mpg.de/cone/journals/resource/2059-7983