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  Cell type specific gene expression analysis of prostate needle biopsies resolves tumor tissue heterogeneity

Krönig, M., Walter, M., Drendel, V., Werner, M., Jilg, C. A., Richter, A. S., Backofen, R., McGarry, D., Follo, M., Schultze-Seemann, W., & Schüle, R. (2014). Cell type specific gene expression analysis of prostate needle biopsies resolves tumor tissue heterogeneity. Oncotarget, 6, 1302-1314.

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資料種別: 学術論文

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 作成者:
Krönig, Malte, 著者
Walter, Max, 著者
Drendel, Vanessa, 著者
Werner, Martin, 著者
Jilg, Cordula A., 著者
Richter, Andreas S.1, 著者           
Backofen, Rolf, 著者
McGarry, David, 著者
Follo, Marie, 著者
Schultze-Seemann, Wolfgang, 著者
Schüle, Roland, 著者
所属:
1Department of Epigenetics, Max Planck Institute of Immunobiology and Epigenetics, Max Planck Society, ou_2243644              

内容説明

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キーワード: prostate cancer; RNA detection; living cells; needle biopsy; gene expression; tumor heterogeneity;
 要旨: A lack of cell surface markers for the specific identification, isolation and subsequent analysis of living prostate tumor cells hampers progress in the field. Specific characterization of tumor cells and their microenvironment in a multi-parameter molecular assay could significantly improve prognostic accuracy for the heterogeneous prostate tumor tissue. Novel functionalized gold-nano particles allow fluorescence-based detection of absolute mRNA expression levels in living cells by fluorescent activated flow cytometry (FACS). We use of this technique to separate prostate tumor and benign cells in human prostate needle biopsies based on the expression levels of the tumor marker alpha-methylacyl-CoA racemase (AMACR). We combined RNA and protein detection of living cells by FACS to gate for epithelial cell adhesion molecule (EPCAM) positive tumor and benign cells, EPCAM/CD45 double negative mesenchymal cells and CD45 positive infiltrating lymphocytes. EPCAM positive epithelial cells were further sub-gated into AMACR high and low expressing cells. Two hundred cells from each population and several biopsies from the same patient were analyzed using a multiplexed gene expression profile to generate a cell type resolved profile of the specimen. This technique provides the basis for the clinical evaluation of cell type resolved gene expression profiles as pre-therapeutic prognostic markers for prostate cancer.

資料詳細

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言語: eng - English
 日付: 2014
 出版の状態: 出版
 ページ: -
 出版情報: -
 目次: -
 査読: 査読あり
 識別子(DOI, ISBNなど): eDoc: 701769
 学位: -

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出版物 1

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出版物名: Oncotarget
種別: 学術雑誌
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出版社, 出版地: -
ページ: - 巻号: 6 通巻号: - 開始・終了ページ: 1302 - 1314 識別子(ISBN, ISSN, DOIなど): -