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  RNA-Seq Transcriptome Analysis of Direction-Selective T4/T5 Neurons in Drosophila

Pankova, K., & Borst, A. (2016). RNA-Seq Transcriptome Analysis of Direction-Selective T4/T5 Neurons in Drosophila. PLoS One, 11(9): e0163986. doi:10.1371/journal.pone.0163986.

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© 2016 Pankova, Borst. This is an open access article distributed under the terms of the Creative Commons Attribution License
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Pankova, Katarina1, Author           
Borst, Alexander1, Author           
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1Department: Circuits-Computation-Models / Borst, MPI of Neurobiology, Max Planck Society, ou_1113548              

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Free keywords: MOTION DETECTION; FUNCTIONAL SPECIALIZATION; NEURAL CIRCUIT; PATHWAYS; VISION; GABA; DETECTOR; SYSTEM; FLY; COMPUTATIONScience & Technology - Other Topics;
 Abstract: Neuronal computation underlying detection of visual motion has been studied for more than a half-century. In Drosophila, direction-selective T4/T5 neurons show supralinear signal amplification in response to stimuli moving in their preferred direction, in agreement with the prediction made by the Hassenstein-Reichardt detector. Nevertheless, the molecular mechanism explaining how the Hassenstein-Reichardt model is implemented in T4/T5 cells has not been identified yet. In the present study, we utilized cell type-specific transcriptome profiling with RNA-seq to obtain a complete gene expression profile of T4/T5 neurons. We analyzed the expression of genes that affect neuronal computational properties and can underlie the molecular implementation of the core features of the Hassenstein-Reichardt model to the dendrites of T4/T5 neurons. Furthermore, we used the acquired RNA-seq data to examine the neurotransmitter system used by T4/T5 neurons. Surprisingly, we observed co-expression of the cholinergic markers and the vesicular GABA transporter in T4/T5 neurons. We verified the previously undetected expression of vesicular GABA transporter in T4/T5 cells using VGAT-LexA knock-in line. The provided gene expression dataset can serve as a useful source for studying the properties of direction-selective T4/T5 neurons on the molecular level.

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Language(s): eng - English
 Dates: 2016-09-29
 Publication Status: Published online
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Title: PLoS One
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Publ. Info: San Francisco, CA : Public Library of Science
Pages: - Volume / Issue: 11 (9) Sequence Number: e0163986 Start / End Page: - Identifier: ISSN: 1932-6203
CoNE: https://pure.mpg.de/cone/journals/resource/1000000000277850