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  A method to unmix multiple fluorophores in microscopy images with minimal a priori information

Schlachter, S., Schwedler, S., Esposito, A., Schierle, G. S. K., Moggridge, G. D., & Kaminski, C. F. (2009). A method to unmix multiple fluorophores in microscopy images with minimal a priori information. OPTICS EXPRESS, 17(25), 22747-22760. doi:10.1364/OE.17.022747.

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 Creators:
Schlachter, S.1, Author
Schwedler, S.1, Author
Esposito, A.1, Author
Schierle, G. S. Kaminski1, Author
Moggridge, G. D.1, Author
Kaminski, C. F.2, Author           
Affiliations:
1external, ou_persistent22              
2Max Planck Research Group, Max Planck Institute for the Science of Light, Max Planck Society, ou_2364712              

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Free keywords: LIFETIME IMAGING MICROSCOPY; FLUORESCENCE LIFETIME; DECOMPOSITION; CELLSOptics;
 Abstract: The ability to quantify the fluorescence signals from multiply labeled biological samples is highly desirable in the life sciences but often difficult, because of spectral overlap between fluorescent species and the presence of autofluorescence. Several so called unmixing algorithms have been developed to address this problem. Here, we present a novel algorithm that combines measurements of lifetime and spectrum to achieve unmixing without a priori information on the spectral properties of the fluorophore labels. The only assumption made is that the lifetimes of the fluorophores differ. Our method combines global analysis for a measurement of lifetime distributions with singular value decomposition to recover individual fluorescence spectra. We demonstrate the technique on simulated datasets and subsequently by an experiment on a biological sample. The method is computationally efficient and straightforward to implement. Applications range from histopathology of complex and multiply labelled samples to functional imaging in live cells. (C) 2009 Optical Society of America

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Language(s): eng - English
 Dates: 2009
 Publication Status: Issued
 Pages: 14
 Publishing info: -
 Table of Contents: -
 Rev. Type: -
 Identifiers: ISI: 000272761300051
DOI: 10.1364/OE.17.022747
 Degree: -

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Title: OPTICS EXPRESS
Source Genre: Journal
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Publ. Info: 2010 MASSACHUSETTS AVE NW, WASHINGTON, DC 20036 USA : OPTICAL SOC AMER
Pages: - Volume / Issue: 17 (25) Sequence Number: - Start / End Page: 22747 - 22760 Identifier: ISSN: 1094-4087