Deutsch
 
Hilfe Datenschutzhinweis Impressum
  DetailsucheBrowse

Datensatz

DATENSATZ AKTIONENEXPORT
Zur Ablage hinzufügen
 Lokale TagsFreigabegeschichteDetailsÜbersicht
  deepTools2: a next generation web server for deep-sequencing data analysis

Ramirez, F., Ryan, D. P., Grüning, B., Bhardwaj, V., Kilpert, F., Richter, A. S., et al. (2016). deepTools2: a next generation web server for deep-sequencing data analysis. Nucleic Acids Research (London), 44, W160-W165. doi:10.1093/nar/gkw257.

Item is

 

einblenden: alle

Basisdaten

ausblenden:
Datensatz-Permalink: https://hdl.handle.net/11858/00-001M-0000-002C-B130-8 Versions-Permalink: https://hdl.handle.net/21.11116/0000-0008-A588-4
Genre: Zeitschriftenartikel

Externe Referenzen

ausblenden:
externe Referenz:
https://academic.oup.com/nar/article/44/W1/W160/2499308 (Verlagsversion)
Beschreibung:
-
OA-Status:

Urheber

ausblenden:
 Urheber:
Ramirez, Fidel1, Autor
Ryan, Devon P.1, Autor
Grüning, Björn2, Autor
Bhardwaj, Vivek1, 3, Autor
Kilpert, Fabian1, Autor
Richter, Andreas S.1, Autor
Heyne, Steffen1, Autor
Dündar, Friederike4, Autor
Mnake, Thomas1, Autor
Affiliations:
1Max Planck Institute of Immunobiology and Epigenetics, Max Planck Society, 79108 Freiburg, DE, ou_2243640              
2University of Freiburg, Department of Computer Science, Freiburg, Germany, ou_persistent22              
3Faculty of Biology, University of Freiburg, Freiburg, Germany, ou_persistent22              
4Weill Cornell Medical College, Applied Bioinformatics Core, Department of Physiology and Biophysics, New York, USA, ou_persistent22              

Inhalt

ausblenden:
Schlagwörter: -
 Zusammenfassung: We present an update to our Galaxy-based web server for processing and visualizing deeply sequenced data. Its core tool set, deepTools, allows users to perform complete bioinformatic workflows ranging from quality controls and normalizations of aligned reads to integrative analyses, including clustering and visualization approaches. Since we first described our deepTools Galaxy server in 2014, we have implemented new solutions for many requests from the community and our users. Here, we introduce significant enhancements and new tools to further improve data visualization and interpretation. deepTools continue to be open to all users and freely available as a web service at deeptools.ie-freiburg.mpg.de The new deepTools2 suite can be easily deployed within any Galaxy framework via the toolshed repository, and we also provide source code for command line usage under Linux and Mac OS X. A public and documented API for access to deepTools functionality is also available.

Details

ausblenden:
Sprache(n): eng - English
 Datum: 2016-07-08
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1093/nar/gkw257
 Art des Abschluß: -

Veranstaltung

einblenden:

Entscheidung

einblenden:

Projektinformation

einblenden:

Quelle 1

ausblenden:
Titel: Nucleic Acids Research (London)
  Andere : Nucleic Acids Res
Genre der Quelle: Zeitschrift
 Urheber:
Affiliations:
Ort, Verlag, Ausgabe: Oxford : Oxford University Press
Seiten: - Band / Heft: 44 Artikelnummer: - Start- / Endseite: W160 - W165 Identifikator: ISSN: 0305-1048
CoNE: https://pure.mpg.de/cone/journals/resource/110992357379342