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  Model-independent counting of molecules in single-molecule localization microscopy

Hummer, G., Fricke, F., & Heilemann, M. (2016). Model-independent counting of molecules in single-molecule localization microscopy. Molecular Biology of the Cell, 27(22), 3637-3644. doi:10.1091/mbc.E16-07-0525.

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資料種別: 学術論文

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 作成者:
Hummer, Gerhard1, 著者                 
Fricke, Franziska2, 著者
Heilemann, Mike2, 著者
所属:
1Department of Theoretical Biophysics, Max Planck Institute of Biophysics, Max Planck Society, ou_2068292              
2bInstitute of Physical and Theoretical Chemistry, Goethe-University Frankfurt, 60438 Frankfurt am Main, Germany, ou_persistent22              

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 要旨: Most biomolecular processes rely on tightly controlled stoichiometries, from the formation of molecular assemblies to cellular signaling. Single-molecule localization microscopy studies of fluorophore blinking offer a promising route to probe oligomeric states. Here we show that the distribution of the number of blinking events assumes a universal functional form, independent of photophysics, under relatively mild assumptions. The number of photophysical states, the kinetics of interconversion, and the fraction of active fluorophores enter as two or three constants. This essentially model-independent formulation allows us to determine molecule counts from fluorophore blinking statistics. The formulas hold even if the fluorophores have many different yet unresolved dark states, as long as there is only a single fluorescent state, or if there are different yet unresolvable fluorescent states, as long as there is only a single dark state. We demonstrate the practical applicability of this approach by quantifying the oligomerization states of membrane proteins tagged with the mEos2 fluorescent protein. We find that the model parameters, obtained by likelihood maximization, are transferable. With the counting statistics being independent of the detailed photophysics and its parameters being transferable, the method should be robust and broadly applicable to counting colocalized molecules in vivo and in vitro

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言語: eng - English
 日付: 2016-07-192016-07-222016-07-272016-11-07
 出版の状態: 出版
 ページ: 8
 出版情報: -
 目次: -
 査読: 査読あり
 識別子(DOI, ISBNなど): DOI: 10.1091/mbc.E16-07-0525
 学位: -

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出版物名: Molecular Biology of the Cell
  その他 : Mol. Biol. Cell
種別: 学術雑誌
 著者・編者:
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出版社, 出版地: American Society for Cell Biology
ページ: - 巻号: 27 (22) 通巻号: - 開始・終了ページ: 3637 - 3644 識別子(ISBN, ISSN, DOIなど): ISSN: 1059-1524
CoNE: https://pure.mpg.de/cone/journals/resource/954927716372_1