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  Reverse engineering model structures for soil and ecosystem respiration: the potential of gene expression programming

Ilie, I., Dittrich, P., Carvalhais, N., Jung, M., Heinemeyer, A., Migliavacca, M., Morison, J. I. L., Sippel, S., Subke, J.-A., Wilkinson, M., & Mahecha, M. D. (2017). Reverse engineering model structures for soil and ecosystem respiration: the potential of gene expression programming. Geoscientific Model Development, 10(9), 3519-3545. doi:10.5194/gmd-10-3519-2017.

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資料種別: 学術論文

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BGC2662D.pdf (出版社版), 4MB
ファイルのパーマリンク:
https://hdl.handle.net/11858/00-001M-0000-002D-8F8E-A
ファイル名:
BGC2662D.pdf
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Discussion paper
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公開
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application/pdf / [MD5]
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BGC2662s1.pdf (付録資料), 979KB
ファイルのパーマリンク:
https://hdl.handle.net/11858/00-001M-0000-002D-8F8F-8
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BGC2662s1.pdf
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公開
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application/pdf / [MD5]
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BGC2662.pdf (出版社版), 8MB
ファイルのパーマリンク:
https://hdl.handle.net/11858/00-001M-0000-002D-F82A-0
ファイル名:
BGC2662.pdf
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-
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公開
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application/pdf / [MD5]
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作成者

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 作成者:
Ilie, Iulia1, 2, 著者           
Dittrich, Peter, 著者
Carvalhais, Nuno3, 著者           
Jung, Martin4, 著者           
Heinemeyer, Andreas, 著者
Migliavacca, Mirco5, 著者           
Morison, James I. L., 著者
Sippel, Sebastian1, 2, 著者           
Subke, Jens-Arne, 著者
Wilkinson, Matthew, 著者
Mahecha, Miguel D.1, 著者           
所属:
1Empirical Inference of the Earth System, Dr. Miguel D. Mahecha, Department Biogeochemical Integration, Dr. M. Reichstein, Max Planck Institute for Biogeochemistry, Max Planck Society, ou_1938312              
2IMPRS International Max Planck Research School for Global Biogeochemical Cycles, Max Planck Institute for Biogeochemistry, Max Planck Society, Hans-Knöll-Str. 10, 07745 Jena, DE, ou_1497757              
3Model-Data Integration, Dr. Nuno Carvalhais, Department Biogeochemical Integration, Dr. M. Reichstein, Max Planck Institute for Biogeochemistry, Max Planck Society, ou_1938310              
4Global Diagnostic Modelling, Dr. Martin Jung, Department Biogeochemical Integration, Dr. M. Reichstein, Max Planck Institute for Biogeochemistry, Max Planck Society, ou_1938311              
5Biosphere-Atmosphere Interactions and Experimentation, Dr. M. Migliavacca, Department Biogeochemical Integration, Dr. M. Reichstein, Max Planck Institute for Biogeochemistry, Max Planck Society, ou_1938307              

内容説明

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キーワード: In-situ Observations
 要旨: Accurate modelling of land-atmosphere carbon fluxes is essential for future climate projections. However, the exact responses of carbon cycle processes to climatic drivers often remain uncertain. Presently, knowledge derived from experiments complemented with a steadily evolving body of mechanistic theory provides the main basis for developing the respective models. The strongly increasing availability of measurements may complicate the traditional hypothesis driven path to developing mechanistic models, but it may facilitate new ways of identifying suitable model structures using machine learning as well. Here we explore the potential to derive model formulations automatically from data based on gene expression programming (GEP). GEP automatically (re)combines various mathematical operators to model formulations that are further evolved, eventually identifying the most suitable structures. In contrast to most other machine learning regression techniques, the GEP approach generates models that allow for prediction and possibly for interpretation. Our study is based on two cases: artificially generated data and real observations. Simulations based on artificial data show that GEP is successful in identifying prescribed functions with the prediction capacity of the models comparable to four state-of-the-art machine learning methods (Random Forests, Support Vector Machines, Artificial Neural Networks, and Kernel Ridge Regressions). The case of real observations explores different components of terrestrial respiration at an oak forest in south-east England. We find that GEP retrieved models are often better in prediction than established respiration models. Furthermore, the structure of the GEP models offers new insights to driver selection and interactions. We find previously unconsidered exponential dependencies of respiration on seasonal ecosystem carbon assimilation and water dynamics. However, we also noticed that the GEP models are only partly portable across respiration components; equifinality issues possibly preventing the identification of a "general" terrestrial respiration model. Overall, GEP is a promising tool to uncover new model structures for terrestrial ecology in the data rich era, complementing the traditional approach of model building.

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 日付: 2017-08-212017-09-252017
 出版の状態: 出版
 ページ: -
 出版情報: -
 目次: -
 査読: -
 識別子(DOI, ISBNなど): その他: BGC2662
DOI: 10.5194/gmd-10-3519-2017
 学位: -

関連イベント

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訴訟

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Project information

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Project name : BACI
Grant ID : 640176
Funding program : Horizon 2020 (H2020)
Funding organization : European Commission (EC)

出版物 1

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出版物名: Geoscientific Model Development
  その他 : Geosci. Model Dev.
  省略形 : GMD
種別: 学術雑誌
 著者・編者:
所属:
出版社, 出版地: Göttingen : Copernicus Publ.
ページ: - 巻号: 10 (9) 通巻号: - 開始・終了ページ: 3519 - 3545 識別子(ISBN, ISSN, DOIなど): ISSN: 1991-959X
CoNE: https://pure.mpg.de/cone/journals/resource/1991-959X