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  Value, but high costs in post-deposition data curation

ten Hoopen, P., Amid, C., Buttigieg, P. L., Pafilis, E., Bravakos, P., Cerdeño-Tárraga, A. M., et al. (2016). Value, but high costs in post-deposition data curation. Database (Oxford), online: online, pp. 1-10.

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Item Permalink: https://hdl.handle.net/21.11116/0000-0001-C353-5 Version Permalink: https://hdl.handle.net/21.11116/0000-0006-800B-D
Genre: Journal Article

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 Creators:
ten Hoopen, Petra, Author
Amid, Clara, Author
Buttigieg, Pier Luigi1, Author           
Pafilis, Evangelos, Author
Bravakos, Panos, Author
Cerdeño-Tárraga, Ana M., Author
Gibson, Richard, Author
Kahlke, Tim, Author
Legaki, Aglaia, Author
Narayana Murthy, Kada, Author
Papastefanou, Gabriella, Author
Pereira, Emiliano2, Author           
Rossello, Marc, Author
Toribio, Ana Luisa, Author
Cochrane, Guy, Author
Affiliations:
1HGF MPG Joint Research Group for Deep Sea Ecology & Technology, Max Planck Institute for Marine Microbiology, Max Planck Society, ou_2481702              
2Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society, ou_2481697              

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 Abstract: Discoverability of sequence data in primary data archives is proportional to the richness of contextual information associated with the data. Here, we describe an exercise in the improvement of contextual information surrounding sample records associated with metagenomics sequence reads available in the European Nucleotide Archive. We outline the annotation process and summarize findings of this effort aimed at increasing usability of publicly available environmental data. Furthermore, we emphasize the benefits of such an exercise and detail its costs. We conclude that such a third party annotation approach is expensive and has value as an element of curation, but should form only part of a more sustainable submitter-driven approach.

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Language(s): eng - English
 Dates: 2016-02-09
 Publication Status: Issued
 Pages: 10
 Publishing info: -
 Table of Contents: -
 Rev. Type: Internal
 Identifiers: eDoc: 733252
 Degree: -

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Title: Database (Oxford)
Source Genre: Journal
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Pages: - Volume / Issue: online Sequence Number: online Start / End Page: 1 - 10 Identifier: -