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  Complete genome sequence of Desulfocapsa sulfexigens, a marine deltaproteobacterium specialized in disproportionating inorganic sulfur compounds

Finster, K. W., Kjeldsen, K. U., Kube, M., Reinhardt, R., Mussmann, M., Amann, R., et al. (2013). Complete genome sequence of Desulfocapsa sulfexigens, a marine deltaproteobacterium specialized in disproportionating inorganic sulfur compounds. Standards in Genomic Sciences, 8(1), 58-68.

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Finster, K. W.1, Author           
Kjeldsen, K. U., Author
Kube, M.2, Author           
Reinhardt, R.3, Author           
Mussmann, M.2, Author           
Amann, R.2, Author           
Schreiber, L.2, Author           
Affiliations:
1Department of Biogeochemistry, Max Planck Institute for Marine Microbiology, Max Planck Society, ou_2481693              
2Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society, ou_2481696              
3Department of Microbiology, Max Planck Institute for Marine Microbiology, Max Planck Society, ou_2481695              

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 Abstract: Desulfocapsa sulfexigens SB164P1 (DSM 10523) belongs to the deltaproteobacterial family Desulfobulbaceae and is one of two validly described members of its genus. This strain was selected for genome sequencing, because it is the first marine bacterium reported to thrive on the disproportionation of elemental sulfur, a process with a unresolved enzymatic pathway in which elemental sulfur serves both as electron donor and electron acceptor. Furthermore, in contrast to its phylogenetically closest relatives, which are dissimilatory sulfate-reducers, D. sulfexigens is unable to grow by sulfate reduction and appears metabolically specialized in growing by disproportionating elemental sulfur, sulfite or thiosulfate with CO2 as the sole carbon source. The genome of D. sulfexigens contains the set of genes that is required for nitrogen fixation. In an acetylene assay it could be shown that the strain reduces acetylene to ethylene, which is indicative for N-fixation. The circular chromosome of D. sulfexigens SB164P1 comprises 3,986,761 bp and harbors 3,551 protein-coding genes of which 78% have a predicted function based on auto-annotation. The chromosome furthermore encodes 46 tRNA genes and 3 rRNA operons.

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Language(s): eng - English
 Dates: 2013
 Publication Status: Issued
 Pages: 11
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 Table of Contents: -
 Rev. Type: Internal
 Identifiers: eDoc: 675801
ISI: 000323325500006
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Title: Standards in Genomic Sciences
Source Genre: Journal
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Publ. Info: East Lansing, Mich. : Michigan State Univ. : Genomic Standards Consortium
Pages: - Volume / Issue: 8 (1) Sequence Number: - Start / End Page: 58 - 68 Identifier: ISSN: 1944-3277
CoNE: https://pure.mpg.de/cone/journals/resource/1944-3277