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  From genomics to microevolution and ecology: the case of Salinibacter ruber

Peña, A., Teeling, H., Huerta-Cepas, J., Santos, F., Meseguer, I., Lucio, L., et al. (2011). From genomics to microevolution and ecology: the case of Salinibacter ruber. In A. Ventosa (Ed.), Halophiles and hypersaline environments: current research and future trends (pp. 109-122). Berlin: Springer.

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Item Permalink: https://hdl.handle.net/21.11116/0000-0001-CA41-2 Version Permalink: https://hdl.handle.net/21.11116/0000-0007-6D3D-C
Genre: Book Chapter

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Teeling11.pdf (Publisher version), 381KB
 
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 Creators:
Peña, Arantxa, Author
Teeling, Hanno1, Author           
Huerta-Cepas, Jaime, Author
Santos, Fernado, Author
Meseguer, Inmaculada, Author
Lucio, Lucio, Author
Schmitt-Kopplin, Philippe, Author
Dopazo, Joaquín, Author
Rosselló-Móra, Ramon, Author
Schüler, Margarete1, Author           
Gloeckner, Frank-Oliver2, Author           
Amann, Rudolf1, Author           
Gabaldon, Toni, Author
Antón, Josepha, Author
Affiliations:
1Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society, ou_2481696              
2Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society, ou_2481697              

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 Abstract: Salinibacter ruber is an extremely halophilic bacterium inhabiting environments that are normally dominated by halophilic Archaea. This bacterium shows a high degree of genomic microdiversity illustrated by the fact that new strains with different genomic patterns (and identical ribosomal operons) are continuously isolated from the same ponds where the original strains were retrieved. Here, we investigate the meaning of this microdiversity by comparing the genomic sequences of closely related S. ruber strains with a main focus on the species pangenome and the putative role of phages and lateral gene transfer in the shaping of the microdiversity.

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Language(s): eng - English
 Dates: 2011
 Publication Status: Issued
 Pages: 14
 Publishing info: -
 Table of Contents: -
 Rev. Type: Peer
 Identifiers: eDoc: 605723
 Degree: -

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Title: Halophiles and hypersaline environments: current research and future trends
Source Genre: Book
 Creator(s):
Ventosa, Antonio, Editor
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Publ. Info: Berlin : Springer
Pages: - Volume / Issue: - Sequence Number: - Start / End Page: 109 - 122 Identifier: -