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  Towards digital representation of Drosophila embryogenesis

Preibisch, S., Ejsmont, R., Rohlfing, T., & Tomancak, P. (2008). Towards digital representation of Drosophila embryogenesis. In E. i. M. Electronics Engineers, S. p. S. Biology Society, & I. of Electrical (Eds.), 2008 IEEE International Symposium on Biomedical Imaging (pp. 324-327). Piscataway: IEEE Service Center.

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 Creators:
Preibisch, S.1, Author           
Ejsmont, R.1, Author           
Rohlfing, T., Author
Tomancak, P.1, Author           
Affiliations:
1Max Planck Institute of Molecular Cell Biology and Genetics, Max Planck Society, ou_2340692              

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 Abstract: Animal development can be described as a complex, threedimensional cellular system that changes dramatically across time as a consequence of cell proliferation, differentiation and movement. Using Drosophila embryogenesis as a model we are developing molecular, imaging and image analysis techniques to record an entire developmental system at cellular resolution. We image Drosophila embryos expressing fluorescent markers in toto using Single Plane Illumination Microscopy (SPIM). SPIM offers the unique ability to image large living biological specimens in their entirety by acquiring image stacks from multiple angles while also providing high temporal resolution necessary for following dynamic developmental processes. We have developed an image analysis pipeline that efficiently processes long-term time-lapse multi-view SPIM data by aligning the different angles with high precision for a single time point and propagating the alignment parameters throughout the time series. The registered views are fused using an approach that evaluates the image content in each view.

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 Dates: 2008
 Publication Status: Issued
 Pages: -
 Publishing info: -
 Table of Contents: -
 Rev. Type: -
 Identifiers: eDoc: 414398
Other: 1147
 Degree: -

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Title: 2008 IEEE International Symposium on Biomedical Imaging
Source Genre: Book
 Creator(s):
Electronics Engineers, Engineering in Medicine, Editor
Biology Society, Signal processing Society, Editor
of Electrical, Institute, Editor
Affiliations:
-
Publ. Info: Piscataway : IEEE Service Center
Pages: - Volume / Issue: - Sequence Number: - Start / End Page: 324 - 327 Identifier: -