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  Cell-type-specific metabolic labeling of nascent proteomes in vivo

Alvarez-Castelao, B., Schanzenbächer, C. T., Hanus, C., Glock, C., tom Dieck, S., Dörrbaum, A. R., et al. (2017). Cell-type-specific metabolic labeling of nascent proteomes in vivo. Nature Biotechnology, 35(12), 1196-1201. doi:10.1038/nbt.4016.

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 Creators:
Alvarez-Castelao, Beatriz1, Author           
Schanzenbächer, Christoph T.1, Author           
Hanus, Cyril1, Author           
Glock, Caspar1, Author           
tom Dieck, Susanne1, Author           
Dörrbaum, Aline Ricarda1, Author           
Bartnik, Ina1, Author           
Nassim-Assir, Belquis1, Author           
Ciirdaeva, Elena1, Author           
Mueller, Anke2, Author
Dieterich, Daniela C.2, Author
Tirrell, David A.3, Author
Langer, Julian David4, Author           
Schuman, Erin Margaret1, Author           
Affiliations:
1Synaptic Plasticity Department, Max Planck Institute for Brain Research, Max Planck Society, ou_2461710              
2Institute for Pharmacology and Toxicology, Otto von Guericke University, Magdeburg, ou_persistent22              
3Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California, USA, ou_persistent22              
4Department of Molecular Membrane Biology, Max Planck Institute of Biophysics, Max Planck Society, ou_2068290              

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Language(s): eng - English
 Dates: 2017-12-122017-10-192017-11-06
 Publication Status: Published online
 Pages: -
 Publishing info: -
 Table of Contents: Although advances in protein labeling methods have made it possible to measure the proteme of mixed cell populations, it has not been possible to isolate cell-type-specific proteomes in vivo. This is because the existing methods for metabolic protein labeling in vivo access all cell types. We report the devlopment of a transgenic mouse line where Cre-recombinase-induced expression of a mutant methionyl-tRNA synthetase (L274G) enables the cell-type-specific labeling of nascent proteins with a non-canonical amino-acid and click chemistry. Using immunoblotting, imaging and mass spectrometry, we use our transgenic mouse to label and analyze proteins in excitatory principal neurons and Purkinje neurons in vitro (brain slices) and in vivo. We discover more than 200 proteins that are differentially regulated in hippocampal excitatory neurons by exposing mice to an environment with enriched sensory cues. Our approach can be used to isolate, analyze and quantitate cell-type-specific proteomes and their dynamics in healthy and diseased tissues.
 Rev. Type: Peer
 Identifiers: DOI: 10.1038/nbt.4016
 Degree: -

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Title: Nature Biotechnology
Source Genre: Journal
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Pages: - Volume / Issue: 35 (12) Sequence Number: - Start / End Page: 1196 - 1201 Identifier: ISSN: 1087-0156
DOI: 10.1038/nbt.4016
CoNE: https://pure.mpg.de/cone/journals/resource/954926980065