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  Modeling Hsp70/Hsp40 interaction by multi-scale molecular simulations and coevolutionary sequence analysis

Malinverni, D., Jost-Lopez, A., De Los Rios, P., Hummer, G., & Barducci, A. (2017). Modeling Hsp70/Hsp40 interaction by multi-scale molecular simulations and coevolutionary sequence analysis. eLife, 6: e23471. doi:10.7554/eLife.23471.001.

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Malinverni, Duccio1, Autor
Jost-Lopez, Alfredo2, Autor           
De Los Rios, Paolo1, 3, Autor
Hummer, Gerhard2, 4, Autor                 
Barducci, Alessandro5, 6, Autor
Affiliations:
1Faculté de Sciences de Base, École Polytechnique Fédérale de Lausanne, Switzerland, ou_persistent22              
2Department of Theoretical Biophysics, Max Planck Institute of Biophysics, Max Planck Society, ou_2068292              
3École Polytechnique Fédérale de Lausanne, Switzerland, ou_persistent22              
4Institut für Biophysik, Johann Wolfgang Goethe Universität Frankfurt, Germany, ou_persistent22              
5Inserm, U1054, France, ou_persistent22              
6Université de Montpellier, CNRS, UMR 5048, Centre de Biochimie Structurale, France, ou_persistent22              

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 Zusammenfassung: The interaction between the Heat Shock Proteins 70 and 40 is at the core of the ATPase regulation of the chaperone machinery that maintains protein homeostasis. However, the structural details of the interaction remain elusive and contrasting models have been proposed for the transient Hsp70/Hsp40 complexes. Here we combine molecular simulations based on both coarse-grained and atomistic models with coevolutionary sequence analysis to shed light on this problem by focusing on the bacterial DnaK/DnaJ system. The integration of these complementary approaches resulted in a novel structural model that rationalizes previous experimental observations. We identify an evolutionarily conserved interaction surface formed by helix II of the DnaJ J-domain and a structurally contiguous region of DnaK, involving lobe IIA of the nucleotide binding domain, the inter-domain linker, and the β-basket of the substrate binding domain.

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Sprache(n): eng - English
 Datum: 2016-11-222017-05-102017-05-12
 Publikationsstatus: Online veröffentlicht
 Seiten: 20
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.7554/eLife.23471.001
 Art des Abschluß: -

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Titel: eLife
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: Cambridge : eLife Sciences Publications
Seiten: - Band / Heft: 6 Artikelnummer: e23471 Start- / Endseite: - Identifikator: ISSN: 2050-084X
CoNE: https://pure.mpg.de/cone/journals/resource/2050-084X