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  Analysis of holographic microscopy data to quantitatively investigate three-dimensional settlement dynamics of algal zoospores in the vicinity of surfaces

Heydt, M., Divós, P., Grunze, M., & Rosenhahn, A. (2009). Analysis of holographic microscopy data to quantitatively investigate three-dimensional settlement dynamics of algal zoospores in the vicinity of surfaces. The European Physical Journal E, 30(2), 141-148. doi:10.1140/epje/i2009-10459-9.

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EurPhysJE_30_2009_141.pdf (Any fulltext), 2MB
 
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Heydt, M., Author
Divós, P., Author
Grunze, Michael1, Author           
Rosenhahn, A., Author
Affiliations:
1Cellular Biophysics, Max Planck Institute for Medical Research, Max Planck Society, ou_2364731              

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 Abstract: In this article we describe the technical aspects of digital in-line holographic microscopy to track multiple macrofouling Ulva linza zoospores simultaneously during their exploration of surfaces. Using an effective method of artefact suppression at the edges of holograms in combination with projection of volume reconstructions, a fast algorithm was developed which allows a reliable determination of a large number of subsequent spore positions. Thus, statistical analysis of swimming behaviour in the vicinity of surfaces becomes possible. Using glass surfaces as example, velocity and diving direction distributions are calculated and the swimming behaviour is statistically analysed. Diving direction analysis provides a straightforward way to determine segments within traces with surface contact. The presented method of data analysis allows high throughput analysis of holographic microscopy data and sets the basis for different applications including biofouling.

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Language(s): eng - English
 Dates: 2009-01-152009-06-112009
 Publication Status: Issued
 Pages: 8
 Publishing info: -
 Table of Contents: -
 Rev. Type: Peer
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Title: The European Physical Journal E
  Other : The European Physical Journal E: Soft Matter and Biological Physics
  Abbreviation : EPJ E
Source Genre: Journal
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Publ. Info: Les Ulis; Bologna; Heidelberg : EDP Sciences; Società Italiana di Fisica; Springer
Pages: - Volume / Issue: 30 (2) Sequence Number: - Start / End Page: 141 - 148 Identifier: ISSN: 1292-8941
CoNE: https://pure.mpg.de/cone/journals/resource/954925624277_2