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  An original Eurasian haplotype, HLA-DRB1*14:54-DQB1*05:03, influences the susceptibility to idiopathic achalasia

Furuzawa-Carballeda, J., Zuñiga, J., Hernández-Zaragoza, D. I., Barquera, R., Marques-García, E., Jiménez-Alvarez, L., et al. (2018). An original Eurasian haplotype, HLA-DRB1*14:54-DQB1*05:03, influences the susceptibility to idiopathic achalasia. PLoS One, 13(8): e0201676. doi:10.1371/journal.pone.0201676.

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Furuzawa-Carballeda, Janette, Autor
Zuñiga, Joaquín, Autor
Hernández-Zaragoza, Diana I.1, Autor           
Barquera, Rodrigo1, Autor           
Marques-García, Eduardo, Autor
Jiménez-Alvarez, Luis, Autor
Cruz-Lagunas, Alfredo, Autor
Ramírez, Gustavo, Autor
Regino, Nora E., Autor
Espinosa-Soto, Ramón, Autor
Yunis, Edmond J., Autor
Romero-Hernández, Fernanda, Autor
Azamar-Llamas, Daniel, Autor
Coss-Adame, Enrique, Autor
Valdovinos, Miguel A., Autor
Torres-Landa, Samuel, Autor
Palacios-Ramírez, Axel, Autor
Breña, Blanca, Autor
Alejandro-Medrano, Edgar, Autor
Hernández-Ávila, Axel, Autor
Granados, Julio, AutorTorres-Villalobos, Gonzalo, Autor mehr..
Affiliations:
1Archaeogenetics, Max Planck Institute for the Science of Human History, Max Planck Society, ou_2074310              

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 Zusammenfassung: Idiopathic achalasia is a relatively infrequent esophageal motor disorder for which major histocompatibility complex (MHC) genes are well-identified risk factors. However, no information about HLA-achalasia susceptibility in Mexicans has previously been reported. We studied a group of 91 patients diagnosed with achalasia and 234 healthy controls with Mexican admixed ancestry. HLA alleles and conserved extended haplotypes were analyzed using high-resolution HLA typing based on Sanger and next-generation sequencing technologies. Admixture estimates were determined using HLA-B and short tandem repeats. Results were analyzed by non-parametric statistical analysis and Bonferroni correction. P-values < 0.05 were considered significant. Patients with achalasia had 56.7% Native American genes, 24.7% European genes, 16.5% African genes and 2.0% Asian genes, which was comparable with the estimates in the controls. Significant increases in the frequencies of alleles DRB1*14:54 and DQB1*05:03 and the extended haplotypes DRB1*14:54-DQB1*05:03 and DRB1*11:01-DQB1*03:01, even after Bonferroni correction (pC<0.05), were found in the achalasia group compared to those in the controls. Concluding, the HLA class II alleles HLA-DRB1*14:54:01 and DQB1*05:03:01 and the extended haplotype are risk factors for achalasia in mixed-ancestry Mexican individuals. These results also suggest that the HLA-DRB1*14:54-DQB1*05:03 haplotype was introduced by admixture with European and/or Asian populations.

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Sprache(n): eng - English
 Datum: 2018-08-09
 Publikationsstatus: Online veröffentlicht
 Seiten: 18
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1371/journal.pone.0201676
Anderer: shh1055
 Art des Abschluß: -

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Titel: PLoS One
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: San Francisco, CA : Public Library of Science
Seiten: - Band / Heft: 13 (8) Artikelnummer: e0201676 Start- / Endseite: - Identifikator: ISSN: 1932-6203
CoNE: https://pure.mpg.de/cone/journals/resource/1000000000277850