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  Alternative splicing after gene duplication drives CEACAM1-paralog diversification in the horse

Missbach, S., Aleksic, D., Blaschke, L., Hassemer, T., Lee, K. J., Mansfeld, M., Haenske, J., Handler, J., & Kammerer, R. (2018). Alternative splicing after gene duplication drives CEACAM1-paralog diversification in the horse. BMC Evolutionary Biology, 18:. doi:10.1186/s12862-018-1145-x.

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アイテムのパーマリンク: https://hdl.handle.net/21.11116/0000-0002-C9DC-4 版のパーマリンク: https://hdl.handle.net/21.11116/0000-0002-C9DD-3
資料種別: 学術論文

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Mißbach.pdf (出版社版), 2MB
ファイルのパーマリンク:
https://hdl.handle.net/21.11116/0000-0002-C9DE-2
ファイル名:
Mißbach.pdf
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公開
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application/pdf / [MD5]
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© The Author(s). 2018
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 作成者:
Missbach, Sophie1, 著者
Aleksic, Denis1, 著者
Blaschke, Lisa1, 著者
Hassemer, Timm2, 著者           
Lee, Kyung Jin1, 著者
Mansfeld, Martin1, 著者
Haenske, Jana1, 著者
Handler, Johannes1, 著者
Kammerer, Robert1, 著者
所属:
1external, ou_persistent22              
2Hartl, Franz-Ulrich / Cellular Biochemistry, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565152              

内容説明

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キーワード: PREGNANCY-SPECIFIC GLYCOPROTEINS; FAMILY-MEMBERS; CEA FAMILY; ANTIGEN; EXPRESSION; CEACAM1; IDENTIFICATION; EVOLUTION; PROTEIN; SUPERFAMILYEvolutionary Biology; Genetics & Heredity; Alternative splicing; Gene duplication; Horse; CEA gene family; CEACAM; Signaling motifs; Evolution;
 要旨: Background: The CEA gene family is one of the most rapidly evolving gene families in the human genome. The founder gene of the family is thought to be an ancestor of the inhibitory immune checkpoint molecule CEACAM1. Comprehensive analyses of mammalian genomes showed that the CEA gene family is subject to tremendous gene family expansion and contraction events in different mammalian species. While in some species (e. g. rabbits) less than three CEACAM1 related genes exist, were in others (certain microbat species) up to 100 CEACAM1 paralogs identified. We have recently reported that the horse has also an extended CEA gene family. Since mechanisms of gene family expansion and diversification are not well understood we aimed to analyze the equine CEA gene family in detail.
Results: We found that the equine CEA gene family contains 17 functional CEACAM1-related genes. Nine of them were secreted molecules and eight CEACAMs contain transmembrane and cytoplasmic domain exons, the latter being in the focus of the present report. Only one (CEACAM41) gene has exons coding for activating signaling motifs all other CEACAM1 paralogs contain cytoplasmic exons similar to that of the inhibitory receptor CEACAM1. However, cloning of cDNAs showed that only one CEACAM1 paralog contain functional immunoreceptor tyrosine based inhibitory motifs in its cytoplasmic tail. Three receptors have acquired a stop codon in the transmembrane domain and two have lost their inhibitory motifs due to alternative splicing events. In addition, alternative splicing eliminated the transmembrane exon sequence of the putative activating receptor, rendering it to a secreted molecule. Transfection of eukaryotic cells with FLAG-tagged alternatively spliced CEACAMs indicates that they can be expressed in vivo. Thus detection of CEACAM41 mRNA in activated PBMC suggests that CEACAM41 is secreted by lymphoid cells upon activation.
Conclusions: The results of our study demonstrate that alternative splicing after gene duplication is a potent mechanism to accelerate functional diversification of the equine CEA gene family members. This potent mechanism has created novel CEACAM receptors with unique signaling capacities and secreted CEACAMs which potentially enables equine lymphoid cells to control distantly located immune cells.

資料詳細

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言語: eng - English
 日付: 2018
 出版の状態: オンラインで出版済み
 ページ: 13
 出版情報: -
 目次: -
 査読: -
 識別子(DOI, ISBNなど): ISI: 000428020000001
DOI: 10.1186/s12862-018-1145-x
 学位: -

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出版物 1

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出版物名: BMC Evolutionary Biology
種別: 学術雑誌
 著者・編者:
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出版社, 出版地: BioMed Central
ページ: - 巻号: 18 通巻号: 32 開始・終了ページ: - 識別子(ISBN, ISSN, DOIなど): ISSN: 1471-2148
CoNE: https://pure.mpg.de/cone/journals/resource/111000136905006