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  Massive-parallel Implementation of the Resolution-of-Identity Coupled-cluster Approaches in the Numeric Atom-centered Orbital Framework for Molecular Systems

Shen, T., Zhu, Z., Zhang, I. Y., & Scheffler, M. (2019). Massive-parallel Implementation of the Resolution-of-Identity Coupled-cluster Approaches in the Numeric Atom-centered Orbital Framework for Molecular Systems. Journal of Chemical Theory and Computation, 15(9), 4721-4734. doi:10.1021/acs.jctc.8b01294.

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1810.08142.pdf (Preprint), 7MB
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 Creators:
Shen, Tonghao1, 2, Author           
Zhu, Zhenyu1, Author
Zhang, Igor Ying1, 2, 3, Author           
Scheffler, Matthias2, Author           
Affiliations:
1Department of Chemistry, Fudan University, Shanghai 200433, China, ou_persistent22              
2NOMAD, Fritz Haber Institute, Max Planck Society, ou_3253022              
3MOE Key Laboratory of Computational Physical Science, Fudan University, Shanghai 200433, China, ou_persistent22              

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Free keywords: Physics, Computational Physics, physics.comp-ph, Condensed Matter, Materials Science, cond-mat.mtrl-sci
 Abstract: We present a massive-parallel implementation of the resolution-of-identity
(RI) coupled-cluster approach that includes single, double and perturbatively
triple excitations, namely RI-CCSD(T), in the FHI-aims package for molecular
systems. A domain-based distributed-memory algorithm in the MPI/OpenMP hybrid
framework has been designed to effectively utilize the memory bandwidth and
significantly minimize the interconnect communication, particularly for the
tensor contraction in the evaluation of the particle-particle ladder term. Our
implementation features a rigorous avoidance of the on-the-fly disk storage and
an excellent strong scaling up to 10,000 and more cores. Taking a set of
molecules with different sizes, we demonstrate that the parallel performance of
our CCSD(T) code is competitive with the CC implementations in state-of-the-art
high-performance computing (HPC) computational chemistry packages. We also
demonstrate that the numerical error due to the use of RI approximation in our
RI-CCSD(T) is negligibly small. Together with the correlation-consistent
numeric atom-centered orbital (NAO) basis sets, NAO-VCC-nZ, the method is
applied to produce accurate theoretical reference data for 22 bio-oriented weak
interactions (S22), 11 conformational energies of gaseous cysteine conformers
(CYCONF), and 32 isomerization energies (ISO32).

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Language(s): eng - English
 Dates: 2018-10-182019-01-062019-07-302019-09-10
 Publication Status: Issued
 Pages: 14
 Publishing info: -
 Table of Contents: -
 Rev. Type: Peer
 Degree: -

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Title: Journal of Chemical Theory and Computation
  Other : J. Chem. Theory Comput.
Source Genre: Journal
 Creator(s):
Affiliations:
Publ. Info: Washington, D.C. : American Chemical Society
Pages: 14 Volume / Issue: 15 (9) Sequence Number: - Start / End Page: 4721 - 4734 Identifier: ISSN: 1549-9618
CoNE: https://pure.mpg.de/cone/journals/resource/111088195283832