English
 
Help Privacy Policy Disclaimer
  Advanced SearchBrowse

Item

ITEM ACTIONSEXPORT
  Identification of quantitative trait loci and candidate genes for primary metabolite content in strawberry fruit

Vallarino, J. G., Pott, D. M., Cruz-Rus, E., Miranda, L., Medina-Minguez, J. J., Valpuesta, V., et al. (2019). Identification of quantitative trait loci and candidate genes for primary metabolite content in strawberry fruit. Horticulture Research, 6(1): 4. doi:10.1038/s41438-018-0077-3.

Item is

Files

show Files

Locators

show

Creators

show
hide
 Creators:
Vallarino, J. G.1, Author           
Pott, Delphine M.2, Author
Cruz-Rus, Eduardo2, Author
Miranda, Luis2, Author
Medina-Minguez, Juan J.2, Author
Valpuesta, Victoriano2, Author
Fernie, A. R.1, Author           
Sánchez-Sevilla, José F.2, Author
Osorio, Sonia2, Author
Amaya, Iraida2, Author
Affiliations:
1Central Metabolism, Department Willmitzer, Max Planck Institute of Molecular Plant Physiology, Max Planck Society, ou_1753339              
2external, ou_persistent22              

Content

show
hide
Free keywords: -
 Abstract: Improvement of nutritional and organoleptic quality of fruits is a key goal in current strawberry breeding programs. The ratio of sugars to acids is a determinant factor contributing to fruit liking, although different sugars and acids contribute in varying degrees to this complex trait. A segregating F1 population of 95 individuals, previously characterized for several fruit quality characters, was used to map during 2 years quantitative trait loci (QTL) for 50 primary metabolites, l-ascorbic acid (L-AA) and other related traits such as soluble solid content (SSC), titratable acidity (TA), and pH. A total of 133 mQTL were detected above the established thresholds for 44 traits. Only 12.9% of QTL were detected in the 2 years, suggesting a large environmental influence on primary metabolite content. An objective of this study was the identification of key metabolites that were associated to the overall variation in SSC and acidity. As it was observed in previous studies, a number of QTL controlling several metabolites and traits were co-located in homoeology group V (HG V). mQTL controlling a large variance in raffinose, sucrose, succinic acid, and L-AA were detected in approximate the same chromosomal regions of different homoeologous linkage groups belonging to HG V. Candidate genes for selected mQTL are proposed based on their co-localization, on the predicted function, and their differential gene expression among contrasting F1 progeny lines. RNA-seq analysis from progeny lines contrasting in L-AA content detected 826 differentially expressed genes and identified Mannose-6-phosphate isomerase, FaM6PI1, as a candidate gene contributing to natural variation in ascorbic acid in strawberry fruit.

Details

show
hide
Language(s): eng - English
 Dates: 2019
 Publication Status: Issued
 Pages: -
 Publishing info: -
 Table of Contents: -
 Rev. Type: -
 Identifiers: DOI: 10.1038/s41438-018-0077-3
Other: Vallarino2019
 Degree: -

Event

show

Legal Case

show

Project information

show

Source 1

show
hide
Title: Horticulture Research
Source Genre: Journal
 Creator(s):
Affiliations:
Publ. Info: -
Pages: - Volume / Issue: 6 (1) Sequence Number: 4 Start / End Page: - Identifier: ISBN: 2052-7276