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  Likelihood-free inference with emulator networks

Lueckmann, J.-M., Bassetto, G., Karaletsos, T., & Macke, J. H. (2018). Likelihood-free inference with emulator networks. In Proceedings of Machine Learning Research, PMLR (pp. 32-53).

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https://arxiv.org/abs/1805.09294 (Preprint)
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 Creators:
Lueckmann, Jan-Matthis1, Author
Bassetto, Giacomo1, Author
Karaletsos, Theofanis2, Author           
Macke, Jakob H.1, Author           
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1Max Planck Research Group Neural Systems Analysis, Center of Advanced European Studies and Research (caesar), Max Planck Society, Ludwig-Erhard-Allee 2, 53175 Bonn, DE, ou_2173683              
2External Organizations, ou_persistent22              

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 Abstract: Approximate Bayesian Computation (ABC) provides methods for Bayesian inference in simulation-based stochastic models which do not permit tractable likelihoods. We present a new ABC method which uses probabilistic neural emulator networks to learn synthetic likelihoods on simulated data -- both local emulators which approximate the likelihood for specific observed data, as well as global ones which are applicable to a range of data. Simulations are chosen adaptively using an acquisition function which takes into account uncertainty about either the posterior distribution of interest, or the parameters of the emulator. Our approach does not rely on user-defined rejection thresholds or distance functions. We illustrate inference with emulator networks on synthetic examples and on a biophysical neuron model, and show that emulators allow accurate and efficient inference even on high-dimensional problems which are challenging for conventional ABC approaches.

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Language(s): eng - English
 Dates: 2018-05-23
 Publication Status: Published online
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 Rev. Type: Internal
 Identifiers: arXiv: arXiv:1805.09294
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Title: 1st Symposium on Advances in Approximate Bayesian Inference
Place of Event: Montréal, Canada
Start-/End Date: 2018-12-02

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Title: Proceedings of Machine Learning Research, PMLR
Source Genre: Proceedings
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Pages: - Volume / Issue: 96 Sequence Number: - Start / End Page: 32 - 53 Identifier: ISSN: 2640-3498