Splice Form Prediction using Machine Learning

Raetsch, G; Sonnenburg, S; Srinivasan, J; Müller, K-R; Sommer , R; Schölkopf, B

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Splice Form Prediction using Machine Learning

Raetsch, G., Sonnenburg, S., Srinivasan, J., Müller, K.-R., Sommer, R., & Schölkopf, B. (2006). Splice Form Prediction using Machine Learning. Poster presented at 14th International Conference on Intelligent Systems for Molecular Biology (ISMB 2006), Fortaleza, Brazil.

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Item Permalink: https://hdl.handle.net/21.11116/0000-0004-B622-8 Version Permalink: https://hdl.handle.net/21.11116/0000-0004-B623-7

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http://www.iscb.org/cms_addon/conferences/ismb2006/archive/ismb2006.cbi.cnptia.embrapa.br/posters_list.php (Abstract) Open Access status unknown

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Creators:
Raetsch, G¹, Author
Sonnenburg, S, Author
Srinivasan, J, Author
Müller, K-R, Author
Sommer , R², Author
Schölkopf, B^{3, 4}, Author

Affiliations:
1Friedrich Miescher Laboratory, Max Planck Society, ou_2575692
2Max Planck Institute for Developmental Biology, Max Planck Society, Max-Planck-Ring 5, 72076 Tübingen, DE, ou_2421691
3Max Planck Institute for Biological Cybernetics, Max Planck Society, ou_1497794
4Department Empirical Inference, Max Planck Institute for Biological Cybernetics, Max Planck Society, ou_1497795

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Abstract: Accurate ab initio gene finding is still a major challenge in computational biology. We employ cutting edge machine learning similar to Hidden-Markov-SVMs to assay and improve the accuracy of genome annotations. We applied our system on the C_elegans genome and were able to drastically improve its annotation.

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Dates: Published Online: 2006-08

Publication Status: Published online

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Title: 14th International Conference on Intelligent Systems for Molecular Biology (ISMB 2006)

Place of Event: Fortaleza, Brazil

Start-/End Date: 2006-08-06 - 2006-08-10

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Title: 14th International Conference on Intelligent Systems for Molecular Biology (ISMB 2006)

Source Genre: Proceedings

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Pages: - Volume / Issue: - Sequence Number: H-3 Start / End Page: - Identifier: -