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  Molecule counts in complex oligomers with single-molecule localization microscopy

Baldering, T. N., Bullerjahn, J. T., Hummer, G., Heilemann, M., & Malkusch, S. (2019). Molecule counts in complex oligomers with single-molecule localization microscopy. Journal of Physics D: Applied Physics, 52(47): 474002. doi:10.1088/1361-6463/ab3b65.

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 Urheber:
Baldering, Tim N.1, Autor
Bullerjahn, Jakob T.2, Autor           
Hummer, Gerhard2, Autor           
Heilemann, Mike1, Autor
Malkusch, Sebastian1, Autor
Affiliations:
1Institute of Physical and Theoretical Chemistry, Goethe-University Frankfurt, Frankfurt am Main, Germany, ou_persistent22              
2Department of Theoretical Biophysics, Max Planck Institute of Biophysics, Max Planck Society, ou_2068292              

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Schlagwörter: fluorescent proteins, molecular counting, photoactivated-localization microscopy, single-molecule localization microscopy
 Zusammenfassung: Single-molecule localization microscopy resolves nano-scale protein clusters in cells, and in addition can extract protein copy numbers from within these clusters. A powerful approach for such molecular counting is the analysis of fluorophore blinking using stochastic model functions. Here, we develop a theoretical model for quantitative analysis of PALM data that accounts for the detection efficiency. By this, we are able to extract populations of different oligomers reliably and in complex mixtures. We demonstrate this approach analyzing simulated PALM data of a photoactivatable fluorescent protein. We generate simulations of blinking data of oligomers and of mixtures of oligomers, and show robust oligomer identification. In addition, we demonstrate this approach for experimental PALM data.

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Sprache(n): eng - English
 Datum: 2019-06-082019-08-152019-09-062019-11-20
 Publikationsstatus: Erschienen
 Seiten: 14
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1088/1361-6463/ab3b65
BibTex Citekey: baldering_molecule_2019
 Art des Abschluß: -

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Titel: Journal of Physics D: Applied Physics
  Kurztitel : J. Phys. D: Appl. Phys.
Genre der Quelle: Zeitschrift
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Affiliations:
Ort, Verlag, Ausgabe: Bristol : IOP Publishing
Seiten: - Band / Heft: 52 (47) Artikelnummer: 474002 Start- / Endseite: - Identifikator: ISSN: 0022-3727
CoNE: https://pure.mpg.de/cone/journals/resource/0022-3727