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  Interplay between the Gentlest Ascent Dynamics Method and Conjugate Directions to Locate Transition States

Bofill, J. M., Ribas-Ariño, J., Valero, R., Albareda Piquer, G., Moreira, I. d. P. R., & Quapp, W. (2019). Interplay between the Gentlest Ascent Dynamics Method and Conjugate Directions to Locate Transition States. Journal of Chemical Theory and Computation, 15(10), 5426-5439. doi:10.1021/acs.jctc.8b01061.

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https://dx.doi.org/10.1021/acs.jctc.8b01061 (Verlagsversion)
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 Urheber:
Bofill, J. M.1, 2, Autor
Ribas-Ariño, J.2, 3, Autor
Valero, R.2, 3, Autor
Albareda Piquer, G.2, 3, 4, Autor           
Moreira, I. de P. R.2, 3, Autor
Quapp, W.5, Autor
Affiliations:
1Departament de Química Inorgànica i Orgànica, Secció de Química Orgànica, Universitat de Barcelona, ou_persistent22              
2Institut de Química Teòrica i Computacional (IQTCUB), Universitat de Barcelona, ou_persistent22              
3Departament de Ciència de Materials i Química Física, Universitat de Barcelona, ou_persistent22              
4Theory Group, Theory Department, Max Planck Institute for the Structure and Dynamics of Matter, Max Planck Society, ou_2266715              
5Mathematisches Institut, Universität Leipzig, ou_persistent22              

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 Zusammenfassung: An algorithm to locate transition states on a potential energy surface (PES) is proposed and described. The technique is based on the GAD method where the gradient of the PES is projected into a given direction and also perpendicular to it. In the proposed method, named GAD-CD, the projection is not only applied to the gradient but also to the Hessian matrix. Then, the resulting Hessian matrix is block diagonal. The direction is updated according to the GAD method. Furthermore, to ensure stability and to avoid a high computational cost, a trust region technique is incorporated and the Hessian matrix is updated at each iteration. The performance of the algorithm in comparison with the standard ascent dynamics is discussed for a simple two dimensional model PES. Its efficiency for describing the reaction mechanisms involving small and medium size molecular systems is demonstrated for five molecular systems of interest.

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Sprache(n): eng - English
 Datum: 2018-10-192019-08-212019-10-08
 Publikationsstatus: Erschienen
 Seiten: 14
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1021/acs.jctc.8b01061
 Art des Abschluß: -

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Grant ID : 752822
Förderprogramm : Horizon 2020 (H2020)
Förderorganisation : European Commission (EC)
Projektname : The authors are grateful for the financial support from the Spanish Ministerio de Economı́a y Competitividad, Projects No. CTQ2016-76423-P, CTQ2017-87773-P/AEI/ FEDER, UE and Spanish Structures of Excellence Marı́a de Maeztu program through grant MDM-2017-0767 and Generalitat de Catalunya, project no. 2017 SGR 348. G.A. acknowledges also the financial support from the European Union’s Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement no 752822.
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Quelle 1

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Titel: Journal of Chemical Theory and Computation
  Andere : J. Chem. Theory Comput.
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: Washington, D.C. : American Chemical Society
Seiten: - Band / Heft: 15 (10) Artikelnummer: - Start- / Endseite: 5426 - 5439 Identifikator: ISSN: 1549-9618
CoNE: https://pure.mpg.de/cone/journals/resource/111088195283832