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  Cell Mechanics Based Computational Classification of Red Blood Cells Via Unsupervised Machine Intelligence Applied to Morpho-Rheological Markers

Ge, Y., Rosenddahl, P., Duran, C., Ciucci, S., Töpfner, N., Guck, J., et al. (2019). Cell Mechanics Based Computational Classification of Red Blood Cells Via Unsupervised Machine Intelligence Applied to Morpho-Rheological Markers. IEEE/ACM Transactions on Computational Biology and Bioinformatics. doi:10.1109/TCBB.2019.2945762.

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 Creators:
Ge, Yan1, Author
Rosenddahl, Philipp1, Author
Duran, Claudio2, Author
Ciucci, Sara3, Author
Töpfner, Nicole2, Author
Guck, Jochen3, 4, Author           
Cannistraci, Carlo Vittorio2, Author
Affiliations:
1Biotechnology Center, Technische Universität Dresden, Germany, ou_persistent22              
2external, ou_persistent22              
3Guck Division, Max Planck Institute for the Science of Light, Max Planck Society, ou_3164416              
4Guck Division, Max-Planck-Zentrum für Physik und Medizin, Max Planck Institute for the Science of Light, Max Planck Society, ou_3596668              

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 Abstract: Despite fluorescent cell-labelling being widely employed in biomedical studies, some of its drawbacks are inevitable, with unsuitable fluorescent probes or probes inducing a functional change being the main limitations. Consequently, the demand for and development of label-free methodologies to classify cells is strong and its impact on precision medicine is relevant. Towards this end, high-throughput techniques for cell mechanical phenotyping have been proposed to get a multidimensional biophysical characterization of single cells. With this motivation, our goal here is to investigate the extent to which an unsupervised machine learning methodology, which is applied exclusively on morpho-rheological markers obtained by real-time deformability and fluorescence cytometry (RT-FDC), can address the difficult task of providing label-free discrimination of reticulocytes from mature red blood cells. We focused on this problem, since the characterization of reticulocytes (their percentage and cellular features) in the blood is vital in multiple human disease conditions, especially bone-marrow disorders such as anemia and leukemia. Our approach reports promising label-free results in the classification of reticulocytes from mature red blood cells, and it represents a step forward in the development of high-throughput morpho-rheological-based methodologies for the computational categorization of single cells. Besides, our methodology can be an alternative but also a complementary method to integrate with existing cell-labelling techniques.

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Language(s): eng - English
 Dates: 2019-10-28
 Publication Status: Published online
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 Rev. Type: -
 Identifiers: DOI: 10.1109/TCBB.2019.2945762
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Title: IEEE/ACM Transactions on Computational Biology and Bioinformatics
Source Genre: Journal
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Publ. Info: Piscataway, NJ, USA : Institute of Electrical and Electronics Engineers
Pages: - Volume / Issue: - Sequence Number: - Start / End Page: - Identifier: ISSN: 1545-5963