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  How to Annotate and Submit a Short Linear Motif to the Eukaryotic Linear Motif Resource

Gouw, M., Alvarado-Valverde, J., Čalyševa, J., Diella, F., Kumar, M., Michael, S., et al. (2020). How to Annotate and Submit a Short Linear Motif to the Eukaryotic Linear Motif Resource. In B. Kragelund, & K. Skriver (Eds.), Intrinsically Disordered Proteins: Methods and Protocols (pp. 73-102). New York, NY, USA: Humana. doi:10.1007/978-1-0716-0524-0_4.

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 Urheber:
Gouw, M, Autor
Alvarado-Valverde, J, Autor
Čalyševa, J, Autor
Diella, F, Autor
Kumar, M, Autor
Michael, S, Autor
Van Roey, K, Autor
Dinkel, H1, 2, Autor           
Gibson, TJ, Autor
Affiliations:
1Department of Computational Neuroscience, Max Planck Institute for Biological Cybernetics, Max Planck Society, ou_3017468              
2Max Planck Institute for Biological Cybernetics, Max Planck Society, Spemannstrasse 38, 72076 Tübingen, DE, ou_1497794              

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 Zusammenfassung: Over the past few years, it has become apparent that approximately 35% of the human proteome consists of intrinsically disordered regions. Many of these disordered regions are rich in short linear motifs (SLiMs) which mediate protein-protein interactions. Although these motifs are short and often partially conserved, they are involved in many important aspects of protein function, including cleavage, targeting, degradation, docking, phosphorylation, and other posttranslational modifications. The Eukaryotic Linear Motif resource (ELM) was established over 15 years ago as a repository to store and catalogue the scientific discoveries of motifs. Each motif in the database is annotated and curated manually, based on the experimental evidence gathered from publications. The entries themselves are submitted to ELM by filling in two annotation templates designed for motif class and motif instance annotation. In this protocol, we describe the steps involved in annotating new motifs and how to submit them to ELM.

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 Datum: 2020-072020
 Publikationsstatus: Erschienen
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 Identifikatoren: DOI: 10.1007/978-1-0716-0524-0_4
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Titel: Intrinsically Disordered Proteins: Methods and Protocols
Genre der Quelle: Buch
 Urheber:
Kragelund, BB, Herausgeber
Skriver, K, Herausgeber
Affiliations:
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Ort, Verlag, Ausgabe: New York, NY, USA : Humana
Seiten: - Band / Heft: - Artikelnummer: - Start- / Endseite: 73 - 102 Identifikator: ISBN: 978-1-0716-0523-3

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Titel: Methods in Molecular Biology
Genre der Quelle: Reihe
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Seiten: - Band / Heft: 2141 Artikelnummer: - Start- / Endseite: - Identifikator: -