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  Consensus mutagenesis approach improves the thermal stability of system xc- transporter, xCT, and enables cryo-EM analyses

Oda, K., Lee, Y., Wiriyasermkul, P., Tanaka, Y., Takemoto, M., Yamashita, K., et al. (2020). Consensus mutagenesis approach improves the thermal stability of system xc- transporter, xCT, and enables cryo-EM analyses. Protein Science, 29, 2398-2407. doi:10.1002/pro.3966.

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 Creators:
Oda, Kazumasa1, Author
Lee, Yongchan2, Author           
Wiriyasermkul, Pattama3, Author
Tanaka, Yoko3, Author
Takemoto, Mizuki1, Author
Yamashita, Keitaro1, Author
Nagamori, Shushi3, Author
Nishizawa, Tomohiro1, Author
Nureki, Osamu1, Author
Affiliations:
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan, ou_persistent22              
2Department of Structural Biology, Max Planck Institute of Biophysics, Max Planck Society, ou_2068291              
3Department of Collaborative Research for Bio-Molecular Dynamics, Nara Medical University, Nara, Japan, ou_persistent22              

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 Abstract: System xc- is an amino acid antiporter that imports L-cystine into cells and exports intracellular L-glutamate, at a 1:1 ratio. As L-cystine is an essential precursor for glutathione synthesis, system xc- supports tumor cell growth through glutathione-based oxidative stress resistance and is considered as a potential therapeutic target for cancer treatment. System xc- consists of two subunits, the light chain subunit SLC7A11 (xCT) and the heavy chain subunit SLC3A2 (also known as CD98hc or 4F2hc), which are linked by a conserved disulfide bridge. Although the recent structures of another SLC7 member, L-type amino acid transporter 1 (LAT1) in complex with CD98hc, have provided the structural basis toward understanding the amino acid transport mechanism, the detailed molecular mechanism of xCT remains unknown. To revealthe molecular mechanism, we performed single-particle analyses of the xCT-CD98hc complex. As wild-type xCT-CD98hc displayed poor stability and could not be purified to homogeneity, we applied a consensus mutagenesis approach to xCT. The consensus mutated construct exhibited increased stability as compared to the wild-type, and enabled the cryoelectron microscopy (cryo-EM) map to be obtained at 6.2 å resolution by single-particle analysis. The cryo-EM map revealed sufficient electron density to assign secondary structures. In the xCT structure, the hash and arm domains are well resolved, whereas the bundle domain shows some flexibility. CD98hc is positioned next to the xCT transmembrane domain. This study provides the structural basis of xCT, and our consensus-based strategy could represent a good choice toward solving unstable protein structures.

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Language(s): eng - English
 Dates: 2020-09-262020-06-062020-09-292020-10-052020-12
 Publication Status: Issued
 Pages: 10
 Publishing info: -
 Table of Contents: -
 Rev. Type: Peer
 Identifiers: DOI: 10.1002/pro.3966
BibTex Citekey: oda_consensus_2020
 Degree: -

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Title: Protein Science
Source Genre: Journal
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Publ. Info: Wiley
Pages: - Volume / Issue: 29 Sequence Number: - Start / End Page: 2398 - 2407 Identifier: ISSN: 0961-8368
CoNE: https://pure.mpg.de/cone/journals/resource/954925342760