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  Large histological serial sections for computational tissue volume reconstruction

Braumann, U.-D., Scherf, N., Einenkel, J., Horn, L.-C., Wentzensen, N., Loeffler, M., & Kuska, J.-P. (2007). Large histological serial sections for computational tissue volume reconstruction. Methods of Information in Medicine, 46(5), 614-622. doi:10.1160/ME9065.

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アイテムのパーマリンク: https://hdl.handle.net/21.11116/0000-0007-B957-7 版のパーマリンク: https://hdl.handle.net/21.11116/0000-0007-B958-6
資料種別: 学術論文

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 作成者:
Braumann, U.-D.1, 著者
Scherf, Nico1, 著者           
Einenkel, J.1, 著者
Horn, L.-C.1, 著者
Wentzensen, N.1, 著者
Loeffler, M.1, 著者
Kuska, J.-P.1, 著者
所属:
1External Organizations, ou_persistent22              

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キーワード: Computer-aided image processing; Uterine cervical diseases
 要旨:

Objectives: A proof of principle study was conducted for microscopic tissue volume reconstructions using a new image processing chain operating on alternately stained large histological serial sections.

Methods: Digital histological images were obtained from conventional brightfield transmitted light microscopy. A powerful nonparametric nonlinear optical flow-based registration approach was used. In order to apply a simple but computationally feasible sum-of-squared-differences similarity measure even in case of differing histological stainings, a new consistent tissue segmentation procedure was placed upstream.

Results: Two reconstructions from uterine cervix carcinoma specimen were accomplished, one alternately stained with p16(INK4a) (surrogate tumor marker) and H&E (routine reference), and another with three different alternate stainings, H&E, p16(INK4a), and CD3 (a T-lymphocyte marker). For both cases, due to our segmentation-based reference-free nonlinear registration procedure, resulting tissue reconstructions exhibit utmost smooth image-to-image transitions without impairing warpings.

Conclusions: Our combination of modern nonparametric nonlinear registration and consistent tissue segmentation has turned out to provide a superior tissue reconstruction quality.

資料詳細

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言語: eng - English
 日付: 2007
 出版の状態: 出版
 ページ: -
 出版情報: -
 目次: -
 査読: -
 識別子(DOI, ISBNなど): DOI: 10.1160/ME9065
PMID: 17938788
 学位: -

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出版物 1

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出版物名: Methods of Information in Medicine
種別: 学術雑誌
 著者・編者:
所属:
出版社, 出版地: Stuttgart [etc.] : F.K. Schattauer [etc.]
ページ: - 巻号: 46 (5) 通巻号: - 開始・終了ページ: 614 - 622 識別子(ISBN, ISSN, DOIなど): ISSN: 0026-1270
CoNE: https://pure.mpg.de/cone/journals/resource/954925424164