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  Exploring flow-biofilm-sediment interactions: Assessment of current status and future challenges

Gerbersdorf, S. U., Koca, K., de Beer, D., Chennu, A., Noss, C., Risse-Buhl, U., et al. (2020). Exploring flow-biofilm-sediment interactions: Assessment of current status and future challenges. Water Research, 185: 116182. doi:10.1016/j.watres.2020.116182.

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 Creators:
Gerbersdorf, Sabine Ulrike, Author
Koca, Kaan, Author
de Beer, Dirk1, Author           
Chennu, Arjun1, Author           
Noss, Christian, Author
Risse-Buhl, Ute, Author
Weitere, Markus, Author
Eiff, Olivier, Author
Wagner, Michael, Author
Aberle, Jochen, Author
Schweikert, Michael, Author
Terheiden, Kristina, Author
Affiliations:
1Permanent Research Group Microsensor, Max Planck Institute for Marine Microbiology, Max Planck Society, ou_2481711              

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 Abstract: Biofilm activities and their interactions with physical, chemical and biological processes are of great importance for a variety of ecosystem functions, impacting hydrogeomorphology, water quality and aquatic ecosystem health. Effective management of water bodies requires advancing our understanding of how flow influences biofilm-bound sediment and ecosystem processes and vice-versa. However, research on this triangle of flow-biofilm-sediment is still at its infancy. In this Review, we summarize the current state of the art and methodological approaches in the flow-biofilm-sediment research with an emphasis on biostabilization and fine sediment dynamics mainly in the benthic zone of lotic and lentic environments. Example studies of this three-way interaction across a range of spatial scales from cell (nm - mu m) to patch scale (mm - dm) are highlighted in view of the urgent need for interdisciplinary approaches. As a contribution to the review, we combine a literature survey with results of a pilot experiment that was conducted in the framework of a joint workshop to explore the feasibility of asking interdisciplinary questions. Further, within this workshop various observation and measuring approaches were tested and the quality of the achieved results was evaluated individually and in combination. Accordingly, the paper concludes by highlighting the following research challenges to be considered within the forthcoming years in the triangle of flow-biofilm-sediment:
i) Establish a collaborative work among hydraulic and sedimentation engineers as well as ecologists to study mutual goals with appropriate methods. Perform realistic experimental studies to test hypotheses on flow-biofilm-sediment interactions as well as structural and mechanical characteristics of the bed.
ii) Consider spatially varying characteristics of flow at the sediment-water interface. Utilize combinations of microsensors and non-intrusive optical methods, such as particle image velocimetry and laser scanner to elucidate the mechanism behind biofilm growth as well as mass and momentum flux exchanges between biofilm and water. Use molecular approaches (DNA, pigments, staining, microscopy) for sophisticated community analyses. Link varying flow regimes to microbial communities (and processes) and fine sediment properties to explore the role of key microbial players and functions in enhancing sediment stability (biostabilization).
iii) Link laboratory-scale observations to larger scales relevant for management of water bodies. Conduct field experiments to better understand the complex effects of variable flow and sediment regimes on biostabilization. Employ scalable and informative observation techniques (e.g., hyperspectral imaging, particle tracking) that can support predictions on the functional aspects, such as metabolic activity, bed stability, nutrient fluxes under variable regimes of flow-biofilm-sediment. (C) 2020 Elsevier Ltd. All rights reserved.

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Language(s): eng - English
 Dates: 2020-10-15
 Publication Status: Published online
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Title: Water Research
  Other : Water Res.
Source Genre: Journal
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Publ. Info: Oxford : Pergamon
Pages: - Volume / Issue: 185 Sequence Number: 116182 Start / End Page: - Identifier: ISSN: 0043-1354
CoNE: https://pure.mpg.de/cone/journals/resource/954925451855