English
 
Help Privacy Policy Disclaimer
  Advanced SearchBrowse

Item

ITEM ACTIONSEXPORT
  Biology-inspired visualization of morphogenetic motion in the zebrafish endoderm

Thierbach, K., Shah, G., Glauche, I., Huisken, J., Roeder, I., & Scherf, N. (2016). Biology-inspired visualization of morphogenetic motion in the zebrafish endoderm. In Proceedings of the 13th International Symposium on Biomedical Imaging (ISBI) (pp. 925-929). doi:10.1109/ISBI.2016.7493416.

Item is

Basic

show hide
Genre: Conference Paper

Files

show Files

Locators

show

Creators

show
hide
 Creators:
Thierbach, Konstantin, Author
Shah, Gopi, Author
Glauche, Ingmar, Author
Huisken, Jan, Author
Roeder, Ingo, Author
Scherf, Nico1, Author              
Affiliations:
1External Organizations, ou_persistent22              

Content

show
hide
Free keywords: Data visualization; Embryogenesis; Endoderm; Gastrulation; Tissue formation; Zebrafish
 Abstract: Effective visualization of large, multidimensional image data is a key instrument for data exploration in biological and medical applications. We propose a method to visualize motion patterns on a spherical surface, illustrated for the example of the zebrafish embryo. In particular, we analyze cellular motion by integrating prior knowledge about the underlying biological process and show how this improves visualization and connects to the conceptional description of the gastrulation process. We conclude that specialized visualizations are necessary to match data representation with conceptional ideas and to get a more intuitive understanding of the design principles of embryonic tissue formation.

Details

show
hide
Language(s): eng - English
 Dates: 2016-06-16
 Publication Status: Published online
 Pages: -
 Publishing info: -
 Table of Contents: -
 Rev. Type: -
 Identifiers: DOI: 10.1109/ISBI.2016.7493416
 Degree: -

Event

show

Legal Case

show

Project information

show

Source 1

show
hide
Title: Proceedings of the 13th International Symposium on Biomedical Imaging (ISBI)
Source Genre: Proceedings
 Creator(s):
Affiliations:
Publ. Info: -
Pages: - Volume / Issue: - Sequence Number: - Start / End Page: 925 - 929 Identifier: -