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  AIDeveloper: deep learning image classification in life science and beyond

Kräter, M., Abuhattum Hofemeier, S., Soteriou, D., Jacobi, A., Krüger, T., Guck, J., et al. (2021). AIDeveloper: deep learning image classification in life science and beyond. Advanced Science, 2003743. doi:10.1002/advs.202003743.

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AdvScience_2021_Krater_AIDeveloper.pdf (Publisher version), 5MB
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AdvScience_2021_Krater_AIDeveloper.pdf
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© 2021 The Authors. Advanced Science published by Wiley‐VCH GmbH This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

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 Creators:
Kräter, Martin1, 2, Author           
Abuhattum Hofemeier, Shada1, 2, Author           
Soteriou, Despina1, Author           
Jacobi, Angela1, 2, Author
Krüger, Thomas2, 3, Author
Guck, Jochen1, 2, 4, Author           
Herbig, Maik2, 5, Author           
Affiliations:
1Guck Division, Max Planck Institute for the Science of Light, Max Planck Society, ou_3164416              
2Technische Universität Dresden, ou_persistent22              
3external, ou_persistent22              
4Guck Division, Max-Planck-Zentrum für Physik und Medizin, Max Planck Institute for the Science of Light, Max Planck Society, ou_3596668              
5Guests, Max Planck Institute for the Science of Light, Max Planck Society, ou_2364696              

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 Abstract: Artificial intelligence (AI)‐based image analysis has increased drastically in recent years. However, all applications use individual solutions, highly specialized for a particular task. Here, an easy‐to‐use, adaptable, and open source software, called AIDeveloper (AID) to train neural nets (NN) for image classification without the need for programming is presented. AID provides a variety of NN‐architectures, allowing to apply trained models on new data, obtain performance metrics, and export final models to different formats. AID is benchmarked on large image datasets (CIFAR‐10 and Fashion‐MNIST). Furthermore, models are trained to distinguish areas of differentiated stem cells in images of cell culture. A conventional blood cell count and a blood count obtained using an NN are compared, trained on >1.2 million images, and demonstrated how AID can be used for label‐free classification of B‐ and T‐cells. All models are generated by non‐programmers on generic computers, allowing for an interdisciplinary use.

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Language(s): eng - English
 Dates: 2021-03-18
 Publication Status: Published online
 Pages: -
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 Rev. Type: -
 Identifiers: DOI: 10.1002/advs.202003743
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Title: Advanced Science
  Other : Adv. Sci.
Source Genre: Journal
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Publ. Info: Weinheim : Wiley-VCH
Pages: - Volume / Issue: - Sequence Number: 2003743 Start / End Page: - Identifier: ISSN: 2198-3844
CoNE: https://pure.mpg.de/cone/journals/resource/2198-3844